Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 3.5e-122 441.8 254 100.0
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.1e-104 383.6 255 85.1
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-94 349.7 254 78.7
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.1e-94 348.6 254 79.1
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 2.0e-93 346.3 252 79.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-93 346.3 252 79.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.4e-93 345.5 252 79.4
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 3.6e-90 335.5 254 80.7
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.7e-87 326.6 252 74.6
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 7.0e-86 321.2 252 75.4
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.5e-83 312.8 252 74.6
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.2e-83 312.4 254 73.2
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 9.4e-83 310.8 251 75.7
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 4.7e-82 308.5 251 75.3
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 6.1e-82 308.1 253 75.1
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.3e-81 306.2 252 72.6
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 8.8e-81 304.3 253 71.1
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 1.1e-80 303.9 254 68.5
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.5e-80 303.5 254 67.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 5.7e-80 301.6 253 68.0
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 9.7e-80 300.8 250 74.4
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 9.7e-80 300.8 252 71.8
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.3e-79 300.4 253 64.8
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.7e-79 300.1 253 68.4
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.8e-79 299.3 254 67.3
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 2.8e-79 299.3 252 72.2
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 6.3e-79 298.1 252 71.4
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.1e-78 297.4 252 68.3
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.8e-78 296.6 252 67.9
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.8e-78 296.6 247 68.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 3.1e-78 295.8 252 69.8
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 5.3e-78 295.0 253 67.6
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 5.3e-78 295.0 255 63.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 9.1e-78 294.3 252 69.4
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 9.1e-78 294.3 252 69.4
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.2e-77 293.9 251 70.5
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.6e-77 293.5 252 69.8
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.0e-77 293.1 252 69.4
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.7e-77 292.7 252 68.7
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 5.9e-77 291.6 253 69.6
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.0e-76 290.8 252 66.3
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.3e-76 290.4 252 63.9
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.3e-76 290.4 252 72.2
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 2.2e-76 289.7 252 68.3
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 5.0e-76 288.5 251 69.7
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 5.0e-76 288.5 253 67.2
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 6.5e-76 288.1 251 69.7
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.1e-75 287.3 252 66.3
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 3.2e-75 285.8 252 68.3
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 5.5e-75 285.0 253 67.6
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 7.2e-75 284.6 247 64.4
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 7.2e-75 284.6 253 68.4
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-74 283.9 249 67.5
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.6e-74 283.5 256 66.4
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 8.0e-74 281.2 249 65.9
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 4.0e-73 278.9 255 64.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 4.0e-73 278.9 251 71.7
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 5.2e-73 278.5 252 65.5
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 5.7e-72 275.0 256 67.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 9.8e-72 274.2 252 64.3
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 8.3e-71 271.2 253 68.4
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-70 270.0 252 63.9
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.2e-69 267.3 258 65.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 2.0e-69 266.5 243 68.7
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 2.9e-68 262.7 282 58.9
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-66 255.8 252 63.1
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.0e-65 254.2 253 59.7
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 2.3e-65 253.1 256 65.6
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.0e-65 252.7 226 65.0
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 6.8e-65 251.5 253 62.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 8.8e-65 251.1 257 59.5
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.8e-63 246.1 252 62.7
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 3.7e-63 245.7 260 58.8
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.4e-62 243.8 252 63.9
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.4e-62 243.0 182 73.1
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 9.2e-62 241.1 226 65.5
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 2.9e-60 236.1 184 68.5
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 5.0e-60 235.3 252 58.3
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.9e-59 233.4 162 79.0
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.9e-59 233.4 272 55.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.5e-59 233.0 252 60.7
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.8e-58 229.6 250 61.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.4e-57 227.3 254 57.9
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.0e-57 226.1 252 56.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.2e-56 224.2 253 58.9
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 2.0e-56 223.4 254 57.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.6e-56 223.0 183 66.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 4.4e-56 222.2 234 60.7
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 5.7e-56 221.9 249 58.2
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.3e-55 220.7 253 57.3
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.2e-55 219.9 223 66.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 5.4e-54 215.3 254 52.8
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 9.2e-54 214.5 243 56.4
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.6e-53 213.8 253 49.8
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.6e-53 213.8 254 58.3
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 7.8e-53 211.5 207 62.3
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 5.6e-51 205.3 252 56.3
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.8e-49 200.3 184 60.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 7.0e-46 188.3 259 44.8
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.6e-44 181.4 158 65.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.1e-42 176.8 259 42.9
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 6.8e-41 171.8 259 50.2
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 9.2e-38 161.4 262 38.5
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.1e-37 160.2 154 55.8
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.1e-36 155.6 164 60.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 7.3e-35 151.8 130 66.2
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.3e-31 141.0 274 43.4
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.0e-28 131.3 95 72.6
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.0e-28 131.3 95 72.6
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 9.6e-27 124.8 253 37.5
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.9e-25 118.6 225 42.7
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 5.8e-24 115.5 250 39.6
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 3.2e-22 109.8 167 43.7
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.9e-19 100.5 124 46.8
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 9.6e-19 98.2 79 69.6
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 2.4e-14 83.6 189 33.3
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 3.0e-12 76.6 45 75.6
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 1.8e-09 67.4 104 46.2
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.5e-08 64.3 57 56.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 2.0e-08 63.9 103 43.7
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 9.3e-06 55.1 108 31.5


User provided reference genes

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