Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 4.0e-274 947.6 507 100.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 4.6e-238 827.8 556 80.6
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.1e-234 816.6 556 79.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-231 805.1 555 78.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 5.4e-231 804.3 555 78.6
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.3e-228 795.0 555 78.0
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-227 792.7 570 76.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.8e-226 787.3 555 77.3
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-224 783.1 555 77.5
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.5e-204 716.5 568 69.7
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 6.9e-202 707.6 568 68.3
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.2e-201 706.8 555 69.9
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.9e-200 702.2 556 69.6
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.1e-199 700.3 566 68.6
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.4e-199 699.9 567 69.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.4e-199 699.9 567 68.8
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 4.2e-199 698.4 567 69.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.9e-197 691.8 565 69.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.9e-196 689.5 567 67.5
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.9e-196 689.5 550 68.9
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.3e-196 688.3 568 67.1
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.3e-195 686.8 565 67.1
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 4.8e-195 684.9 568 66.9
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 8.2e-195 684.1 558 67.9
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.8e-194 682.9 557 67.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.0e-194 680.6 564 67.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 7.6e-193 677.6 565 66.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 7.6e-193 677.6 564 66.7
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.3e-192 676.8 564 67.9
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.7e-192 676.4 564 66.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.8e-192 675.2 564 67.9
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 6.5e-192 674.5 573 66.3
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.5e-191 672.5 557 66.2
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 7.1e-191 671.0 557 67.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.8e-189 666.4 564 65.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 5.1e-189 664.8 558 65.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 8.7e-189 664.1 569 64.7
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.9e-188 662.9 561 67.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 7.4e-188 661.0 563 65.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 7.4e-188 661.0 558 66.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.1e-186 657.1 558 65.4
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 4.1e-186 655.2 564 65.1
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.9e-184 649.0 629 59.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 3.8e-184 648.7 558 64.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 5.0e-184 648.3 556 65.1
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.2e-183 645.6 564 65.1
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 4.2e-183 645.2 560 64.3
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 3.6e-182 642.1 586 61.4
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 3.0e-181 639.0 556 64.2
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.1e-180 637.1 561 64.7
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.3e-179 633.6 563 61.8
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.3e-179 633.6 568 62.0
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.8e-179 632.5 566 62.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.1e-178 628.6 560 62.0
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.9e-176 622.5 567 61.2
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.4e-175 620.2 560 61.2
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.0e-173 614.0 564 60.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.4e-173 613.6 560 60.2
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.9e-173 612.1 563 59.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.6e-172 609.4 580 58.3
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 4.4e-172 608.6 553 60.6
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 5.7e-172 608.2 553 60.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-170 603.6 556 59.9
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.4e-170 603.6 563 59.9
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.3e-170 601.7 557 59.2
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 5.3e-170 601.7 556 60.1
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 4.5e-169 598.6 556 59.5
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 4.5e-169 598.6 564 60.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.0e-168 597.4 556 59.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.0e-168 597.4 557 60.1
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.0e-168 595.1 565 59.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 5.0e-168 595.1 556 59.0
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.1e-166 589.7 556 58.8
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.1e-166 589.7 556 58.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 3.9e-165 585.5 552 59.8
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.5e-164 583.6 556 59.0
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 9.7e-164 580.9 563 59.0
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.8e-162 576.6 529 62.9
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 7.7e-161 571.2 559 58.7
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.1e-154 547.7 560 56.2
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.7e-152 543.5 556 56.1
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.7e-152 543.5 556 56.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.7e-152 543.5 567 54.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.0e-152 542.0 556 55.9
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.5e-152 541.2 521 57.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.5e-151 540.4 556 56.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.5e-151 540.4 556 56.1
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.2e-150 537.3 565 56.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.6e-145 520.4 561 53.7
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 6.6e-144 515.0 502 59.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 6.6e-144 515.0 569 51.7
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.1e-142 510.0 559 53.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 9.2e-138 494.6 478 57.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.9e-136 489.6 512 55.3
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.9e-136 489.6 629 48.3
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.5e-113 412.9 400 57.2
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.8e-110 403.3 249 88.0
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.6e-102 377.5 301 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.2e-99 367.1 559 41.5
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.7e-97 360.1 569 38.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 4.6e-97 359.4 447 51.5
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.3e-94 351.3 405 54.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.6e-94 349.7 307 64.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.8e-85 320.9 593 35.8
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.1e-85 320.1 223 76.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.9e-83 313.5 530 38.1
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 2.0e-76 290.8 589 37.0
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.8e-69 267.7 215 66.5
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 7.2e-66 255.8 170 71.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.7e-56 222.6 151 77.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.6e-55 220.7 488 36.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 2.0e-44 184.5 221 48.9
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 8.5e-43 179.1 157 68.8
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.4e-40 171.8 367 38.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.6e-36 158.3 589 26.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.7e-28 129.4 67 88.1
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 8.9e-16 89.4 56 85.7
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.6e-09 67.4 64 57.8
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.7e-09 67.0 47 76.6
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 5.8e-07 60.1 41 80.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.9e-06 57.8 150 30.7


User provided reference genes

Program Settings