Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.5e-142 509.6 269 100.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 5.4e-97 358.2 267 71.2
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.8e-92 343.2 267 70.0
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 3.4e-91 339.0 267 68.9
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 1.7e-90 336.7 251 71.3
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.7e-90 336.7 236 74.2
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 3.3e-86 322.4 234 71.4
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 9.6e-86 320.9 249 68.3
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 1.3e-85 320.5 248 68.5
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 7.6e-83 311.2 245 68.6
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 3.0e-79 299.3 239 66.9
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 1.5e-78 297.0 247 65.6
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.8e-77 292.7 233 67.4
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 4.8e-77 292.0 245 66.1
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.1e-76 290.8 251 61.8
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 4.1e-76 288.9 236 66.5
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 8.5e-74 281.2 225 65.8
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 1.4e-73 280.4 243 63.8
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 4.2e-73 278.9 233 63.9
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 4.2e-73 278.9 258 58.1
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 5.5e-73 278.5 245 62.0
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 7.2e-73 278.1 253 61.3
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 1.6e-72 276.9 250 60.4
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 2.1e-72 276.6 248 60.9
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.0e-71 274.2 248 60.5
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 3.9e-71 272.3 253 59.3
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 2.5e-70 269.6 228 64.5
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 9.7e-70 267.7 248 59.7
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 2.8e-69 266.2 226 62.4
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 3.1e-68 262.7 244 59.0
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.5e-67 260.4 225 62.2
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.5e-67 258.8 227 61.7
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 2.5e-65 253.1 228 61.4
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 4.2e-65 252.3 242 57.9
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 9.4e-65 251.1 247 58.3
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.2e-64 250.8 244 58.2
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.8e-63 246.9 236 59.7
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 8.8e-63 244.6 236 60.2
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.5e-62 243.8 259 55.6
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 2.0e-62 243.4 261 55.9
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.0e-62 243.4 231 60.2
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 7.4e-62 241.5 263 54.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 1.7e-61 240.4 243 56.4
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.4e-60 237.3 234 56.8
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.4e-60 237.3 234 56.8
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.4e-60 237.3 245 55.1
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 2.4e-60 236.5 236 55.9
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 4.1e-60 235.7 237 56.1
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 5.3e-60 235.3 231 55.8
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.2e-59 234.2 230 57.8
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.2e-59 234.2 230 57.8
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 3.4e-59 232.6 237 55.7
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 1.0e-58 231.1 241 52.7
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.2e-58 229.9 237 54.4
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 3.8e-58 229.2 245 53.5
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 1.4e-57 227.3 233 54.5
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 2.5e-57 226.5 237 53.2
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 7.2e-57 224.9 241 51.5
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.6e-56 223.8 241 51.5
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 2.1e-56 223.4 257 51.4
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.1e-56 223.4 254 51.6
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.6e-56 222.6 299 47.2
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 4.7e-56 222.2 259 51.4
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 6.1e-56 221.9 254 50.8
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 7.9e-56 221.5 245 50.6
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.0e-55 221.1 241 51.0
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 6.7e-55 218.4 221 57.0
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 6.7e-55 218.4 236 51.7
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 2.0e-54 216.9 248 50.8
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 2.6e-54 216.5 250 51.6
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 3.3e-54 216.1 233 56.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 4.4e-54 215.7 248 49.6
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 4.4e-54 215.7 259 49.0
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 7.4e-54 214.9 249 51.4
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 7.4e-54 214.9 232 51.3
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.7e-53 212.6 229 53.3
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 2.4e-52 209.9 246 50.8
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.9e-50 203.0 148 70.9
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 3.8e-50 202.6 239 48.5
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 5.0e-50 202.2 234 49.1
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 5.5e-49 198.7 184 62.5
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.7e-45 187.2 242 48.8
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.5e-41 174.1 237 47.3
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 3.2e-41 172.9 230 47.4
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 8.0e-40 168.3 237 46.0
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 8.0e-40 168.3 244 44.3
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.2e-35 154.5 240 45.8
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.6e-35 154.1 288 36.5
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.6e-35 154.1 290 36.9
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 7.7e-35 151.8 139 62.6
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.8e-34 149.4 139 61.9
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.5e-33 147.5 167 53.9
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.9e-33 147.1 317 34.1
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 8.3e-29 131.7 109 61.5
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.8e-28 130.6 201 44.3
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 3.5e-27 126.3 143 51.7
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.9e-25 120.6 97 67.0
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 7.3e-25 118.6 229 39.3
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 6.1e-24 115.5 98 62.2
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 5.9e-19 99.0 185 37.3
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 9.5e-17 91.7 141 44.7
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 3.6e-16 89.7 120 45.8
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 6.6e-10 68.9 231 27.7
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 1.6e-08 64.3 55 67.3


User provided reference genes

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