Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 0.0e+00 2055.4 1083 100.0
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 8.2e-136 489.2 1164 35.8
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 1.7e-80 305.4 1155 31.2
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 9.3e-71 273.1 1136 28.9
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 1.2e-70 272.7 1068 28.5
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 5.4e-63 247.3 1048 28.5
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 1.5e-60 239.2 1108 28.8
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 3.3e-60 238.0 1052 28.1
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 3.8e-56 224.6 1083 26.8
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 8.2e-51 206.8 1069 26.7
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 3.4e-49 201.4 432 36.1
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 1.4e-47 196.1 297 41.8
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.9e-47 195.7 404 36.4
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 9.3e-47 193.4 356 37.1
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 3.5e-46 191.4 298 43.6
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 2.5e-44 185.3 298 42.3
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 4.1e-42 177.9 240 50.4
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.2e-41 176.4 402 34.1
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 2.2e-40 172.2 1075 25.0
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 2.9e-40 171.8 452 33.2
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 9.4e-39 166.8 235 41.7
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 8.8e-37 160.2 334 36.5
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 3.3e-36 158.3 127 63.0
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.3e-35 156.4 244 39.3
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 1.3e-35 156.4 200 45.0
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 8.2e-35 153.7 132 57.6
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.8e-34 152.5 302 37.7
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 5.3e-34 151.0 271 41.3
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 5.3e-34 151.0 384 34.4
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 1.2e-33 149.8 250 37.6
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 1.2e-33 149.8 220 41.8
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 1.5e-33 149.4 123 61.0
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 2.6e-33 148.7 299 37.5
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 3.4e-33 148.3 574 30.7
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 1.3e-32 146.4 367 32.4
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 1.3e-32 146.4 226 43.4
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 1.7e-32 146.0 261 37.9
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 2.2e-32 145.6 269 37.2
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 3.8e-32 144.8 227 41.0
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 6.5e-32 144.1 332 34.0
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 1.1e-31 143.3 244 38.5
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.4e-31 142.9 327 33.3
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.4e-31 142.9 210 40.5
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 7.2e-31 140.6 237 38.4
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 7.9e-30 137.1 259 39.8
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 2.3e-29 135.6 162 48.8
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 3.0e-29 135.2 331 32.6
FAN02G4422 Fragaria x ananassa HOM05D020102 ORTHO05D009536 3.0e-29 135.2 565 29.4
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 1.5e-28 132.9 170 48.2
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 7.4e-28 130.6 336 30.1
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 7.4e-28 130.6 157 43.9
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 8.2e-27 127.1 331 30.8
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 1.5e-25 122.9 120 51.7
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.2e-24 119.0 249 35.7
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 5.0e-24 117.9 111 54.1
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 7.2e-23 114.0 152 43.4
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.2e-22 113.2 237 33.8
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 4.7e-22 111.3 120 46.7
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.8e-21 109.4 112 50.9
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 5.2e-21 107.8 332 28.9
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 2.6e-20 105.5 228 32.5
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 7.4e-20 104.0 276 31.9
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 7.4e-20 104.0 220 31.8
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 8.2e-19 100.5 132 43.9
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 1.1e-18 100.1 232 34.9
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 2.4e-18 99.0 158 39.2
Atru.chr1.1237 Acer truncatum HOM05D007911 ORTHO05D009536 4.1e-18 98.2 388 29.1
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 5.3e-18 97.8 128 46.1
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 1.2e-17 96.7 130 43.8
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 1.6e-17 96.3 112 47.3
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 2.0e-17 95.9 137 40.1
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.0e-16 93.6 241 32.0
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 1.3e-16 93.2 293 30.4
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 2.9e-16 92.0 243 30.5
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 3.8e-16 91.7 132 43.2
Ciclev10004930m.g Citrus clementina HOM05D007911 ORTHO05D044634 8.5e-16 90.5 405 25.4
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 8.5e-16 90.5 173 34.7
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 8.5e-16 90.5 277 31.8
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 4.2e-15 88.2 119 40.3
Haze_19794 Corylus avellana HOM05D007911 ORTHO05D009536 5.5e-15 87.8 404 28.5
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 7.2e-15 87.4 222 31.5
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 7.2e-15 87.4 221 29.9
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 8.0e-14 84.0 237 33.8
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 1.4e-13 83.2 182 31.9
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 8.8e-13 80.5 237 32.9
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 1.5e-12 79.7 191 35.1
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.0e-12 79.3 204 29.4
Duzib106G0470 Durio zibethinus HOM05D007911 ORTHO05D009536 6.3e-11 74.3 213 33.8
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 3.1e-10 72.0 258 30.2
GSVIVG01033236001 Vitis vinifera HOM05D007911 ORTHO05D009536 2.5e-07 62.4 138 37.7
arahy.Tifrunner.gnm1.ann1.808QWK Arachis hypogaea HOM05D007911 ORTHO05D009536 9.4e-07 60.5 61 47.5
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 1.2e-06 60.1 78 46.2


User provided reference genes

Program Settings