Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 3.2e-172 608.2 288 100.0
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.8e-159 565.8 288 93.1
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.7e-158 560.5 287 91.3
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 7.2e-156 553.9 286 89.9
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 1.0e-154 550.1 286 90.2
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.4e-154 549.7 286 88.5
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.8e-154 549.3 286 90.6
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 4.0e-154 548.1 287 89.9
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 1.5e-153 546.2 286 89.9
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 3.4e-153 545.0 286 89.2
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.7e-152 542.7 286 88.5
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 6.3e-152 540.8 286 89.2
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 6.3e-152 540.8 286 89.2
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 8.3e-152 540.4 286 88.5
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 1.1e-151 540.0 286 88.8
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.1e-151 540.0 287 87.5
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 1.4e-151 539.7 286 88.1
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 5.4e-151 537.7 283 88.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.0e-151 537.3 289 88.2
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 9.2e-151 537.0 288 86.8
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.6e-150 536.2 286 87.1
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.0e-150 535.8 286 85.7
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 2.0e-150 535.8 286 88.5
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 2.0e-150 535.8 286 88.5
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 3.5e-150 535.0 286 87.1
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 4.5e-150 534.6 286 87.1
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 5.9e-150 534.3 285 85.6
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 7.7e-150 533.9 286 86.4
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 1.3e-149 533.1 286 88.1
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.3e-149 533.1 284 87.3
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 5.0e-149 531.2 286 87.1
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 8.6e-149 530.4 286 84.6
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.1e-148 530.0 293 85.3
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 1.9e-148 529.3 286 86.0
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 1.9e-148 529.3 286 85.7
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.3e-148 528.5 286 85.7
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.3e-148 528.5 286 85.7
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 3.3e-148 528.5 286 85.7
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 4.3e-148 528.1 284 86.6
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 5.6e-148 527.7 286 85.3
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 7.3e-148 527.3 286 86.4
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 7.3e-148 527.3 283 86.2
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 7.3e-148 527.3 289 85.5
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 1.2e-147 526.6 286 85.3
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.6e-147 526.2 288 84.4
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 4.7e-147 524.6 286 86.4
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 4.7e-147 524.6 286 85.3
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 1.8e-146 522.7 288 85.1
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 1.8e-146 522.7 286 84.6
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 2.3e-146 522.3 286 85.3
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 2.3e-146 522.3 288 83.7
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 4.0e-146 521.5 284 85.6
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 6.8e-146 520.8 286 84.3
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.5e-145 519.6 287 85.0
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.5e-145 519.6 286 82.5
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 2.0e-145 519.2 288 83.0
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 2.6e-145 518.8 285 85.3
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 5.7e-145 517.7 283 83.7
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 9.8e-145 516.9 286 84.3
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.3e-144 516.5 283 84.5
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 2.2e-144 515.8 285 83.2
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 3.7e-144 515.0 284 83.5
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 6.4e-144 514.2 286 83.2
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 8.3e-144 513.8 286 82.2
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.8e-143 512.7 284 84.2
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 7.0e-143 510.8 286 82.9
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.6e-142 509.6 298 80.9
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 3.5e-142 508.4 283 82.7
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.5e-142 508.4 286 82.2
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 5.9e-142 507.7 303 79.2
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 3.0e-141 505.4 283 83.4
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 3.9e-141 505.0 274 83.9
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 5.0e-141 504.6 287 82.9
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 5.0e-141 504.6 281 82.6
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.1e-140 503.4 284 81.7
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 4.3e-140 501.5 281 82.9
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 1.6e-139 499.6 286 83.2
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 2.1e-139 499.2 286 80.8
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 2.8e-139 498.8 273 84.2
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.8e-138 496.1 286 80.4
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 4.0e-138 495.0 286 80.4
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 5.2e-138 494.6 283 79.9
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 6.8e-138 494.2 286 81.1
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.2e-137 493.4 286 80.4
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 1.2e-137 493.4 281 81.5
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 2.6e-137 492.3 332 72.0
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 4.4e-137 491.5 286 80.8
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 4.4e-137 491.5 288 78.8
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 7.5e-137 490.7 278 82.4
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 9.8e-137 490.3 286 79.7
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 4.9e-136 488.0 287 80.8
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 6.4e-136 487.6 281 80.8
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 6.4e-136 487.6 282 80.9
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 1.1e-135 486.9 286 79.7
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.4e-135 486.5 286 79.4
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.4e-135 486.5 287 80.5
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 1.4e-135 486.5 287 80.8
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 1.4e-135 486.5 287 80.8
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 2.4e-135 485.7 288 79.5
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.1e-135 485.0 286 78.7
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 4.1e-135 485.0 286 79.4
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.1e-135 485.0 286 78.7
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 5.4e-135 484.6 286 79.0
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 7.8e-134 480.7 286 78.7
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 7.3e-132 474.2 277 79.1
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 8.9e-130 467.2 281 77.6
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 9.8e-129 463.8 287 74.6
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 4.1e-127 458.4 248 86.3
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.6e-126 456.4 274 77.7
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 3.9e-125 451.8 278 74.1
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.6e-123 446.4 235 87.7
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 4.7e-123 444.9 287 76.0
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 3.2e-119 432.2 227 92.1
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 2.1e-118 429.5 234 82.1
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 2.5e-116 422.5 283 67.8
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 7.8e-110 401.0 282 66.3
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 1.8e-106 389.8 280 65.4
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 2.0e-105 386.3 279 65.6
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 8.4e-104 380.9 198 88.9
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 7.4e-100 367.9 221 77.4
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 5.6e-92 341.7 288 60.8
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.3e-91 340.5 284 58.8
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 4.8e-91 338.6 274 63.1
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 2.2e-80 303.1 172 83.7
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.1e-79 300.8 167 83.2
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 1.9e-79 300.1 259 54.4
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 3.7e-67 259.2 278 47.8
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 2.9e-64 249.6 279 47.3
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 1.4e-63 247.3 285 47.4
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.2e-62 244.2 233 53.6
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 1.8e-53 213.8 114 81.6
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 3.6e-46 189.5 103 81.6
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 5.2e-21 105.9 80 63.8
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 1.1e-15 88.2 80 55.0
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 8.1e-14 82.0 52 73.1
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 3.4e-12 76.6 56 58.9
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 1.6e-06 57.8 39 74.4


User provided reference genes

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