Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.3e-73 279.6 142 100.0
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.1e-51 206.8 142 74.6
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.4e-40 169.9 138 68.8
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 7.2e-40 167.5 142 63.4
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.4e-38 163.3 137 65.0
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-38 163.3 137 65.0
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 4.4e-37 158.3 142 60.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 7.4e-37 157.5 132 63.6
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.7e-36 156.4 142 59.9
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 3.7e-36 155.2 142 57.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 4.8e-36 154.8 140 57.9
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.3e-36 154.5 137 62.8
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.1e-35 151.8 103 74.8
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.6e-34 149.8 103 73.8
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 4.5e-34 148.3 139 56.1
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 4.5e-34 148.3 142 58.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.0e-33 147.1 139 59.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.0e-33 147.1 139 59.0
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.0e-33 147.1 139 59.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.2e-33 146.0 142 56.3
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 2.2e-33 146.0 131 57.3
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 3.8e-33 145.2 142 55.6
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 4.2e-32 141.7 112 65.2
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 5.5e-32 141.4 142 54.9
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 7.2e-32 141.0 136 53.7
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 7.2e-32 141.0 138 55.8
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 1.6e-31 139.8 130 58.5
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 4.7e-31 138.3 114 63.2
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 6.1e-31 137.9 137 57.7
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 8.0e-31 137.5 142 56.3
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.0e-30 137.1 141 53.2
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.4e-30 136.7 115 62.6
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.0e-30 135.2 131 55.7
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 4.0e-30 135.2 121 62.0
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 5.2e-30 134.8 140 55.0
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 8.8e-30 134.0 142 51.4
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.5e-29 133.3 129 55.0
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 1.5e-29 133.3 126 56.3
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 3.7e-28 128.6 106 61.3
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 6.3e-28 127.9 132 56.1
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 1.1e-27 127.1 127 54.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.1e-27 127.1 135 52.6
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.1e-27 125.6 137 51.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 4.1e-27 125.2 136 51.5
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.2e-26 123.6 135 48.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.0e-26 122.9 110 60.0
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.7e-26 122.5 111 58.6
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.5e-26 122.1 137 52.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 3.5e-26 122.1 125 54.4
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 7.7e-26 120.9 74 79.7
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.2e-25 119.4 111 57.7
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 3.8e-25 118.6 127 54.3
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 5.0e-25 118.2 141 48.9
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 8.5e-25 117.5 132 50.8
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 7.2e-24 114.4 116 56.0
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 9.4e-24 114.0 142 47.9
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 9.4e-24 114.0 125 50.4
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.6e-23 113.2 131 45.8
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-23 112.8 120 54.2
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.1e-23 112.8 65 81.5
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.6e-23 112.1 131 51.9
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.0e-23 110.9 72 75.0
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.0e-22 110.5 84 65.5
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 3.0e-22 109.0 66 80.3
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 4.0e-22 108.6 72 76.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.0e-21 106.3 118 52.5
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.0e-21 106.3 134 47.8
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 3.4e-21 105.5 86 65.1
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 4.4e-21 105.1 127 48.0
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 4.4e-21 105.1 68 76.5
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.3e-20 103.6 65 75.4
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.3e-20 103.6 142 47.2
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.2e-20 102.8 64 76.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 2.2e-20 102.8 87 60.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.3e-20 101.3 64 73.4
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 6.3e-20 101.3 91 56.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.3e-20 101.3 81 59.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 6.3e-20 101.3 141 42.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 8.3e-20 100.9 122 49.2
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 8.3e-20 100.9 62 75.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.4e-19 100.1 122 48.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.4e-19 100.1 122 48.4
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.8e-19 99.8 107 52.3
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.8e-19 99.8 74 63.5
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.4e-19 99.4 67 71.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 3.1e-19 99.0 62 77.4
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.1e-19 99.0 81 58.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 4.1e-19 98.6 62 74.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 5.4e-19 98.2 81 64.2
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 5.4e-19 98.2 136 45.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 9.1e-19 97.4 71 66.2
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 9.1e-19 97.4 70 67.1
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.0e-18 96.3 92 53.3
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 3.5e-18 95.5 92 53.3
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 4.5e-18 95.1 92 53.3
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.9e-17 92.4 127 42.5
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 6.5e-17 91.3 89 50.6
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 6.5e-17 91.3 91 57.1
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 6.5e-17 91.3 80 65.0
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.3e-16 89.0 67 64.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 3.3e-16 89.0 67 64.2
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 7.2e-16 87.8 70 64.3
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 8.0e-15 84.3 75 54.7
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.5e-13 80.1 72 58.3
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 2.0e-13 79.7 72 52.8
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 7.5e-13 77.8 67 61.2
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.4e-11 73.6 53 64.2
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.3e-09 66.2 96 40.6
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 5.0e-09 65.1 93 41.9


User provided reference genes

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