Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G038000 Prunus persica HOM05D000003 ORTHO05D000004 2.5e-129 465.3 214 100.0
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 6.4e-40 168.3 167 46.1
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 4.1e-39 165.6 167 44.3
Prupe.1G572100 Prunus persica HOM05D000003 ORTHO05D000004 2.9e-32 142.9 167 41.3
Prupe.3G150400 Prunus persica HOM05D000003 ORTHO05D000004 1.5e-17 94.0 95 47.4
CANSAT35G1373 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-17 93.6 115 37.4
CANSAT54G1054 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-16 90.9 109 37.6
CSS0043417 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-13 80.9 97 36.1
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.2e-11 74.3 90 38.9
MBI19_g24077_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.2e-11 72.0 108 35.2
CANSAT64G1703 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-10 70.1 95 32.6
PSO782G5208 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-10 68.6 98 37.8
MBI18_g24955_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-09 67.8 97 36.1
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.5e-09 67.4 95 33.7
PSO421G0296 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-09 66.6 100 32.0
MBI19_g12139_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.4e-09 66.2 78 35.9
MBI16_g26387_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.4e-09 65.9 95 36.8
PSO170G5070 Papaver somniferum HOM05D000003 ORTHO05D000004 4.4e-09 65.9 100 37.0
MBI14_g43802_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.8e-09 65.5 75 34.7
PSO210G2218 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-09 65.5 99 36.4
PSO478G0954 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-09 65.1 96 41.7
PSO782G5428 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-09 65.1 100 36.0
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-09 64.7 95 30.5
QL10p019376 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-08 64.3 95 30.5
MBI19_g41117_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 1.7e-08 63.9 75 34.7
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 8.4e-08 61.6 141 24.8
PSO541G2963 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-08 61.6 101 30.7
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-07 61.2 141 24.8
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.1e-07 61.2 95 29.5
PSO063G3902 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 60.5 168 25.0
Atru.chr4.578 Acer truncatum HOM05D000003 ORTHO05D000651 2.4e-07 60.1 139 25.2
CANSAT78G0265 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-07 60.1 104 32.7
MBI14_g28268_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.4e-07 60.1 93 31.2
MBI16_g11562_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.2e-07 59.3 77 36.4
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-07 58.9 116 25.9
MBI01_g01371_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.1e-07 58.5 64 43.8
PSO384G2309 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-07 58.5 75 34.7
Sed0026271 Sechium edule HOM05D000003 ORTHO05D000006 7.1e-07 58.5 102 28.4
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 9.3e-07 58.2 128 27.3
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-06 57.8 78 35.9
PSO675G3659 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-06 57.4 78 34.6
PSO063G4383 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-06 57.0 76 31.6
MBI09_g32374_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.7e-06 56.6 72 36.1
PSO675G7543 Papaver somniferum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 76 34.2
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 2.7e-06 56.6 95 28.4
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 2.7e-06 56.6 75 36.0
MBI05_g07844_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.5e-06 56.2 65 38.5
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 3.5e-06 56.2 101 33.7
Atru.chr2.1816 Acer truncatum HOM05D000003 ORTHO05D000022 4.6e-06 55.8 77 24.7
MBI18_g10205_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 75 33.3
MBI18_g39153_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 91 30.8
PSO017G5521 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 179 22.3
PSO302G0306 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 75 36.0
PSO339G0909 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 100 33.0
PSO832G2376 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 99 28.3
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 4.6e-06 55.8 75 36.0
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.0e-06 55.5 121 29.8
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 6.0e-06 55.5 168 23.2
MBI14_g22160_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.8e-06 55.1 76 31.6
MBI18_g21564_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.8e-06 55.1 78 32.1
PSO063G4784 Papaver somniferum HOM05D000003 ORTHO05D000004 7.8e-06 55.1 87 34.5
PSO339G6547 Papaver somniferum HOM05D000493 ORTHO05D001638 7.8e-06 55.1 97 34.0
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.8e-06 55.1 75 32.0


User provided reference genes

Program Settings