Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G035500 Prunus persica HOM05D000003 ORTHO05D011650 2.7e-103 378.6 189 100.0
Prupe.7G038400 Prunus persica HOM05D000003 ORTHO05D010102 7.8e-34 147.9 123 68.3
Prupe.8G101300 Prunus persica HOM05D008097 ORTHO05D010102 9.0e-22 107.8 126 54.0
Prupe.3G126800 Prunus persica HOM05D008097 ORTHO05D010102 9.3e-19 97.8 155 43.2
CANSAT01G1093 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-12 75.5 141 34.8
CANSAT64G2778 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-11 74.3 141 34.8
RcHm_v2.0_Chr5g0038961 Rosa chinensis HOM05D008833 ORTHO05D000167 9.3e-11 71.2 131 35.9
FvH4_7g10254 Fragaria vesca HOM05D008097 ORTHO05D010102 1.6e-10 70.5 129 33.3
CANSAT56G0762 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-10 69.7 141 31.9
CANSAT56G3299 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-10 69.7 130 32.3
Prupe.2G069500 Prunus persica HOM05D000003 ORTHO05D010102 2.7e-10 69.7 150 34.0
RcHm_v2.0_Chr7g0187741 Rosa chinensis HOM05D008097 ORTHO05D010102 2.7e-10 69.7 128 37.5
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 3.5e-10 69.3 153 25.5
FvH4_2g20801 Fragaria vesca HOM05D008097 ORTHO05D000167 3.5e-10 69.3 129 34.1
CANSAT21G1499 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-10 68.6 130 32.3
CANSAT54G0934 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-10 68.6 141 31.9
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 7.9e-10 68.2 130 31.5
QL10p011272 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-09 67.8 133 31.6
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.8e-09 67.0 161 29.2
RcHm_v2.0_Chr1g0354891 Rosa chinensis HOM05D008097 ORTHO05D010102 1.8e-09 67.0 128 36.7
CANSAT64G1009 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-09 66.6 130 31.5
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 3.0e-09 66.2 126 34.1
CANSAT21G2387 Cannabis sativa HOM05D000003 ORTHO05D000167 3.9e-09 65.9 140 32.9
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 8.7e-09 64.7 133 33.1
CANSAT25G3179 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 63.9 130 32.3
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-08 63.2 139 33.1
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-08 62.8 134 30.6
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 4.3e-08 62.4 141 30.5
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 5.7e-08 62.0 153 30.7
RcHm_v2.0_Chr4g0432871 Rosa chinensis HOM05D000003 ORTHO05D015270 7.4e-08 61.6 167 26.9
CANSAT64G1764 Cannabis sativa HOM05D000003 ORTHO05D000167 9.7e-08 61.2 146 32.2
RcHm_v2.0_Chr2g0147661 Rosa chinensis HOM05D000003 ORTHO05D010713 9.7e-08 61.2 146 29.5
Atru.chr6.2805 Acer truncatum HOM05D001254 ORTHO05D000167 1.6e-07 60.5 123 33.3
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 1.6e-07 60.5 128 34.4
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.1 135 31.1
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-07 60.1 128 31.2
Atru.chr2.1558 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-07 59.7 124 31.5
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 140 32.1
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-07 59.7 128 33.6
FvH4_5g31851 Fragaria vesca HOM05D010636 ORTHO05D011274 3.7e-07 59.3 128 32.0
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 3.7e-07 59.3 148 31.1
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-07 59.3 128 31.2
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 4.8e-07 58.9 131 32.1
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-07 58.9 137 29.9
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 4.8e-07 58.9 142 31.0
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-07 58.9 139 30.9
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 4.8e-07 58.9 129 33.3
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-07 58.5 128 29.7
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-07 58.5 128 32.8
CANSAT01G1765 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-07 58.5 132 31.1
CANSAT21G1802 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-07 58.5 130 29.2
CANSAT64G0029 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-07 58.5 139 32.4
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-07 58.5 139 32.4
Prupe.6G204400 Prunus persica HOM05D000003 ORTHO05D015270 6.3e-07 58.5 131 32.1
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 6.3e-07 58.5 128 32.8
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 6.3e-07 58.5 128 32.8
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 8.2e-07 58.2 155 27.1
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-07 58.2 132 31.1
CANSAT01G1104 Cannabis sativa HOM05D000003 ORTHO05D000167 8.2e-07 58.2 139 33.1
CANSAT21G2100 Cannabis sativa HOM05D000003 ORTHO05D000167 8.2e-07 58.2 140 31.4
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 8.2e-07 58.2 151 28.5
CANSAT25G0508 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 139 31.7
CANSAT35G1565 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 159 30.2
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 57.4 135 28.9
Atru.chr11.1731 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 57.4 133 29.3
COL.COLO4_10225 Corchorus olitorius HOM05D000003 ORTHO05D000167 1.4e-06 57.4 160 26.9
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 1.4e-06 57.4 132 33.3
Medtr7g033205 Medicago truncatula HOM05D009584 ORTHO05D011650 1.4e-06 57.4 47 53.2
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.0 137 30.7
CANSAT01G1633 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 57.0 133 30.1
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 57.0 134 29.9
QL11p050659 Quercus lobata HOM05D002097 ORTHO05D002248 1.8e-06 57.0 132 28.8
RcHm_v2.0_Chr4g0437761 Rosa chinensis HOM05D008097 ORTHO05D010102 1.8e-06 57.0 123 33.3
Sed0009869 Sechium edule HOM05D000003 ORTHO05D000167 1.8e-06 57.0 156 32.1
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.6 137 29.9
QL04p021054 Quercus lobata HOM05D000688 ORTHO05D005697 2.4e-06 56.6 84 36.9
RcHm_v2.0_Chr3g0468731 Rosa chinensis HOM05D008097 ORTHO05D010102 2.4e-06 56.6 128 30.5
Atru.chr10.1148 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-06 56.2 133 27.8
CANSAT01G1851 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 56.2 139 30.9
CANSAT11G0945 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 56.2 132 35.6
FvH4_2g13111 Fragaria vesca HOM05D000003 ORTHO05D011274 3.1e-06 56.2 139 27.3
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 3.1e-06 56.2 157 32.5
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 3.1e-06 56.2 167 29.3
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 3.1e-06 56.2 128 30.5
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 166 27.1
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 158 26.6
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 166 27.7
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 153 23.5
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 4.1e-06 55.8 150 23.3
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 138 29.0
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-06 55.8 131 28.2
CANSAT21G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-06 55.8 128 30.5
CANSAT35G1728 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-06 55.8 176 27.3
CANSAT56G3918 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-06 55.8 127 30.7
CANSAT78G0805 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-06 55.8 139 30.9
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 4.1e-06 55.8 158 25.3
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 4.1e-06 55.8 164 29.9
Atru.chr11.145 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.5 131 30.5
Atru.chr4.2041 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.5 128 29.7
Atru.chr5.1665 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.5 169 22.5
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.5 171 23.4
Atru.chr8.67 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.5 133 28.6
CANSAT11G1690 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-06 55.5 158 26.6
Medtr8g051775 Medicago truncatula HOM05D009584 ORTHO05D011650 5.3e-06 55.5 52 50.0
Prupe.6G272800 Prunus persica HOM05D000003 ORTHO05D000167 5.3e-06 55.5 132 31.1
QL03p029332 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-06 55.5 145 27.6
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 6.9e-06 55.1 128 33.6
CANSAT64G0950 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-06 55.1 152 28.9
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 6.9e-06 55.1 67 41.8
RcHm_v2.0_Chr1g0339311 Rosa chinensis HOM05D008097 ORTHO05D010102 6.9e-06 55.1 133 30.8
Atru.chr5.2789 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.7 163 25.8
Atru.chr7.573 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.7 137 29.9
Atru.chr8.695 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.7 145 29.7
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.7 127 33.1
CANSAT01G1910 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-06 54.7 139 28.8
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-06 54.7 142 31.7
CANSAT64G0681 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-06 54.7 152 30.3
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 9.0e-06 54.7 157 32.5
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 9.0e-06 54.7 129 29.5
vmacro03056 Vaccinium macrocarpon HOM05D000511 ORTHO05D000413 9.0e-06 54.7 157 29.3


User provided reference genes

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