Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 2.1e-67 258.8 126 100.0
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.3e-32 143.3 82 89.0
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 7.1e-31 137.5 82 85.4
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 3.3e-28 128.6 75 84.0
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 7.3e-28 127.5 75 82.7
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 1.1e-26 123.6 98 65.3
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 2.0e-25 119.4 74 79.7
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.0e-25 119.4 98 63.3
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.0e-25 119.4 74 81.1
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 2.0e-25 119.4 74 81.1
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 3.4e-25 118.6 98 62.2
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 2.9e-24 115.5 104 57.7
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 4.6e-22 108.2 70 74.3
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 4.6e-22 108.2 70 74.3
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 6.0e-22 107.8 70 75.7
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 7.8e-22 107.5 74 70.3
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 7.8e-22 107.5 74 70.3
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 7.8e-22 107.5 74 70.3
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 7.8e-22 107.5 74 74.3
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 1.0e-21 107.1 74 70.3
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 1.0e-21 107.1 66 77.3
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 1.0e-21 107.1 74 73.0
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.0e-21 107.1 74 73.0
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.0e-21 107.1 74 73.0
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 1.0e-21 107.1 74 70.3
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 1.3e-21 106.7 66 77.3
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 1.7e-21 106.3 66 75.8
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 1.7e-21 106.3 66 75.8
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 1.7e-21 106.3 66 75.8
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 1.7e-21 106.3 66 75.8
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 1.7e-21 106.3 66 75.8
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.7e-21 106.3 72 73.6
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 2.3e-21 105.9 72 69.4
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 3.0e-21 105.5 74 68.9
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 3.9e-21 105.1 66 74.2
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 5.1e-21 104.8 66 75.8
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 5.1e-21 104.8 66 75.8
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 5.1e-21 104.8 66 75.8
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 5.1e-21 104.8 72 70.8
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 5.1e-21 104.8 70 72.9
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.5e-20 103.2 81 65.4
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 2.5e-20 102.4 71 73.2
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 4.3e-20 101.7 97 56.7
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.6e-19 99.8 81 64.2
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 1.6e-19 99.8 70 71.4
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 1.4e-18 96.7 70 68.6
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 1.4e-18 96.7 74 70.3
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 2.4e-18 95.9 71 66.2
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 1.5e-17 93.2 106 47.2
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.5e-17 93.2 71 64.8
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 8.4e-16 87.4 74 58.1
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 9.3e-15 84.0 70 61.4
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 9.3e-15 84.0 70 61.4
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 4.6e-14 81.6 57 66.7
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.7e-13 79.7 48 83.3
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.7e-13 79.7 48 83.3
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 1.7e-13 79.7 48 83.3
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.5e-12 76.6 70 57.1
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 1.5e-12 76.6 48 81.2
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 7.4e-12 74.3 71 50.7
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.8e-11 72.4 52 67.3
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.4e-10 70.1 53 67.9
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 5.3e-10 68.2 64 59.4
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 1.5e-09 66.6 47 63.8
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.4e-09 65.5 45 73.3
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 4.5e-09 65.1 68 44.1
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 2.2e-08 62.8 71 43.7
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.9e-07 59.7 43 69.8
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 5.5e-07 58.2 66 42.4
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 5.5e-07 58.2 66 42.4


User provided reference genes

Program Settings