Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 3.1e-51 204.9 110 100.0
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 1.9e-27 125.9 130 65.4
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.7e-25 119.4 138 60.1
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.5e-24 116.3 126 62.7
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 4.3e-24 114.8 127 60.6
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.8e-22 109.4 75 76.0
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 2.4e-22 109.0 51 96.1
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 2.4e-22 109.0 51 96.1
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 8.9e-22 107.1 104 67.3
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.6e-21 105.5 118 62.7
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 3.8e-20 101.7 51 88.2
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 4.9e-20 101.3 51 88.2
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 5.4e-19 97.8 85 58.8
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 1.2e-18 96.7 51 84.3
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 1.6e-18 96.3 51 82.4
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 2.1e-18 95.9 51 86.3
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 3.5e-18 95.1 51 80.4
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 4.6e-18 94.7 51 84.3
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.3e-17 93.2 120 58.3
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 1.3e-17 93.2 51 82.4
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 2.3e-17 92.4 51 78.4
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 5.1e-17 91.3 51 82.4
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 5.1e-17 91.3 112 61.6
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 6.6e-17 90.9 51 82.4
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 6.6e-17 90.9 51 82.4
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 6.6e-17 90.9 117 58.1
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 8.7e-17 90.5 72 65.3
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 8.7e-17 90.5 113 59.3
FAN03G0192 Fragaria x ananassa HOM05D002831 ORTHO05D010484 1.1e-16 90.1 52 82.7
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.1e-16 90.1 51 78.4
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 1.1e-16 90.1 51 78.4
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.5e-16 89.7 73 63.0
Gorai.006G199300 Gossypium raimondii HOM05D002831 ORTHO05D010484 1.5e-16 89.7 51 76.5
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 3.3e-16 88.6 51 74.5
CSS0001563 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 7.3e-16 87.4 51 74.5
CSS0038907 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 7.3e-16 87.4 51 74.5
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 9.6e-16 87.0 51 74.5
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 1.2e-15 86.7 132 52.3
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 3.6e-15 85.1 51 78.4
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 3.6e-15 85.1 51 72.5
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 3.6e-15 85.1 52 76.9
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 3.6e-15 85.1 124 54.0
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 4.7e-15 84.7 51 72.5
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 8.1e-15 84.0 63 71.4
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 8.1e-15 84.0 51 76.5
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.1e-14 83.6 126 43.7
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.1e-14 83.6 63 71.4
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 1.1e-14 83.6 107 60.7
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 3.1e-14 82.0 126 50.8
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 3.1e-14 82.0 72 62.5
Lalb_Chr03g0034821 Lupinus albus HOM05D002831 ORTHO05D010484 6.9e-14 80.9 50 74.0
CiPaw.12G018400 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.2e-13 80.1 44 84.1
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 1.5e-13 79.7 51 74.5
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 3.4e-13 78.6 119 46.2
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 5.8e-13 77.8 51 66.7
Lalb_Chr21g0305231 Lupinus albus HOM05D002831 ORTHO05D010484 5.8e-13 77.8 52 71.2
Gohir.A12G255400 Gossypium hirsutum HOM05D002831 ORTHO05D010484 7.6e-13 77.4 51 66.7
Gohir.D12G256800 Gossypium hirsutum HOM05D002831 ORTHO05D010484 7.6e-13 77.4 51 66.7
Gorai.008G275000 Gossypium raimondii HOM05D002831 ORTHO05D010484 7.6e-13 77.4 51 66.7
Solyc03g007990.2 Solanum lycopersicum HOM05D002831 ORTHO05D010484 7.6e-13 77.4 51 72.5
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 3.8e-12 75.1 51 74.5
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 8.4e-12 73.9 48 70.8
CAN.G126.13 Capsicum annuum HOM05D002831 ORTHO05D010484 1.1e-11 73.6 51 70.6
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.1e-11 73.6 104 58.7
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 5.4e-11 71.2 51 64.7
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 5.4e-11 71.2 118 50.8
CSS0020125 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 7.1e-11 70.9 51 66.7
CSS0026204 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 7.1e-11 70.9 51 66.7
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 1.2e-10 70.1 51 60.8
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 2.1e-10 69.3 51 62.7
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 6.0e-10 67.8 51 60.8
CAN.G204.17 Capsicum annuum HOM05D002831 ORTHO05D010484 7.8e-10 67.4 51 68.6
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 6.6e-09 64.3 51 62.7
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 6.6e-09 64.3 51 62.7
Lalb_Chr06g0161311 Lupinus albus HOM05D002831 ORTHO05D010484 1.1e-08 63.5 44 72.7
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 1.5e-08 63.2 51 58.8
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 1.5e-08 63.2 51 58.8
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 4.3e-08 61.6 51 56.9
BolC7t45935H Brassica oleracea HOM05D002831 ORTHO05D010484 8.1e-07 57.4 51 54.9
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 8.1e-07 57.4 61 55.7
Sabra05G0003700 Salix brachista HOM05D000273 ORTHO05D000198 8.1e-07 57.4 37 70.3
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 1.8e-06 56.2 33 69.7
Peaxi162Scf00618g00726 Petunia axillaris HOM05D002831 ORTHO05D010484 1.8e-06 56.2 44 68.2
Carub.0007s1526 Capsella rubella HOM05D002831 ORTHO05D010484 5.3e-06 54.7 45 57.8
CARHR233140 Cardamine hirsuta HOM05D002831 ORTHO05D010484 9.0e-06 53.9 35 65.7


User provided reference genes

Program Settings