Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 3.6e-55 218.0 111 100.0
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 1.1e-27 126.7 99 68.7
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.4e-22 109.8 95 64.2
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 3.0e-17 92.0 101 57.4
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 3.9e-17 91.7 87 59.8
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 5.7e-16 87.8 89 59.6
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 1.3e-15 86.7 89 52.8
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 1.6e-15 86.3 86 55.8
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 3.7e-15 85.1 95 50.5
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 1.8e-14 82.8 84 57.1
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 3.1e-14 82.0 89 50.6
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 7.6e-13 77.4 85 56.5
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 1.3e-12 76.6 88 58.0
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 2.2e-12 75.9 100 46.0
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 3.8e-12 75.1 88 55.7
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 5.0e-12 74.7 104 50.0
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 6.5e-12 74.3 91 47.3
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 6.5e-12 74.3 90 52.2
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 6.5e-12 74.3 86 53.5
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 8.5e-12 73.9 87 54.0
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 8.5e-12 73.9 103 43.7
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 8.5e-12 73.9 81 55.6
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 8.5e-12 73.9 88 51.1
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.1e-11 73.6 88 56.8
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 1.1e-11 73.6 96 45.8
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 2.5e-11 72.4 87 52.9
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 2.5e-11 72.4 96 47.9
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 3.2e-11 72.0 100 45.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 4.2e-11 71.6 86 53.5
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 4.2e-11 71.6 96 52.1
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 4.2e-11 71.6 98 53.1
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 5.5e-11 71.2 104 47.1
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 9.4e-11 70.5 95 46.3
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 1.6e-10 69.7 89 47.2
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 2.1e-10 69.3 93 50.5
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 2.7e-10 68.9 92 46.7
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 3.6e-10 68.6 101 49.5
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 7.9e-10 67.4 91 48.4
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 1.0e-09 67.0 88 47.7
Prupe.7G016200 Prunus persica HOM05D007691 ORTHO05D008758 1.0e-09 67.0 83 51.8
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 1.4e-09 66.6 89 52.8
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 1.4e-09 66.6 80 50.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 1.8e-09 66.2 88 47.7
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 2.3e-09 65.9 89 43.8
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.3e-09 65.9 86 50.0
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 3.0e-09 65.5 83 47.0
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 3.0e-09 65.5 88 47.7
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 3.9e-09 65.1 94 43.6
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 5.1e-09 64.7 120 43.3
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 1.1e-08 63.5 84 48.8
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 1.9e-08 62.8 89 48.3
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 1.9e-08 62.8 80 50.0
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.5e-08 62.4 33 78.8
PGR042G3671 Punica granatum HOM05D026603 ORTHO05D008758 2.5e-08 62.4 81 44.4
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 3.7e-07 58.5 83 43.4
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 6.3e-07 57.8 50 60.0
Hund15081 Selenicereus undatus HOM05D036338 ORTHO05D008758 6.3e-07 57.8 82 45.1
Phvul.001G106200 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 8.2e-07 57.4 90 43.3
TPR.G33917 Trifolium pratense HOM05D007691 ORTHO05D008758 8.2e-07 57.4 82 43.9
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 1.1e-06 57.0 80 46.2
TAR623G0909 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.1e-06 57.0 72 52.8
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 1.4e-06 56.6 110 40.9
SalBow1G6856 Salvia bowleyana HOM05D007691 ORTHO05D008758 1.8e-06 56.2 75 45.3
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 2.4e-06 55.8 71 43.7
MD12G1012300 Malus domestica HOM05D007691 ORTHO05D008758 3.1e-06 55.5 83 44.6
Oeu063715.1 Olea europaea HOM05D046649 ORTHO05D008758 3.1e-06 55.5 79 46.8
Oeu052775.1 Olea europaea HOM05D026374 ORTHO05D008758 5.3e-06 54.7 88 39.8
Duzib128G0872 Durio zibethinus HOM05D014272 ORTHO05D008758 9.1e-06 53.9 104 39.4


User provided reference genes

Program Settings