Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G016200 Prunus persica HOM05D007691 ORTHO05D008758 2.6e-40 168.3 89 100.0
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 1.9e-22 109.0 82 70.7
MD12G1012300 Malus domestica HOM05D007691 ORTHO05D008758 5.7e-19 97.4 83 66.3
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 1.4e-12 76.3 93 49.5
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 2.3e-12 75.5 91 48.4
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 4.0e-12 74.7 95 49.5
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 2.2e-10 68.9 83 51.8
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 4.9e-10 67.8 94 46.8
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 8.3e-10 67.0 89 49.4
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 3.1e-09 65.1 93 48.4
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 5.4e-09 64.3 95 49.5
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 5.4e-09 64.3 88 40.9
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.2e-08 63.2 88 42.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 1.6e-08 62.8 97 45.4
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 1.6e-08 62.8 89 47.2
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 2.7e-08 62.0 91 44.0
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 2.7e-08 62.0 89 46.1
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 3.5e-08 61.6 91 44.0
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 4.5e-08 61.2 84 50.0
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 5.9e-08 60.8 93 41.9
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 7.8e-08 60.5 86 44.2
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.3e-07 59.7 89 46.1
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 1.3e-07 59.7 93 41.9
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.9e-07 58.5 33 78.8
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 2.9e-07 58.5 90 40.0
arahy.Tifrunner.gnm1.ann1.N1UETT Arachis hypogaea HOM05D007691 ORTHO05D008758 3.9e-07 58.2 95 43.2
arahy.Tifrunner.gnm1.ann1.BJ9957 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.1e-06 56.6 95 42.1
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 1.5e-06 56.2 93 41.9
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 1.5e-06 56.2 87 40.2
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 1.9e-06 55.8 95 41.1
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 3.3e-06 55.1 89 41.6
RcHm_v2.0_Chr3g0495961 Rosa chinensis HOM05D007691 ORTHO05D008758 3.3e-06 55.1 86 47.7
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 4.3e-06 54.7 84 42.9
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 5.6e-06 54.3 94 39.4
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 9.5e-06 53.5 101 40.6
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 9.5e-06 53.5 95 40.0
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 9.5e-06 53.5 93 40.9
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 9.5e-06 53.5 91 42.9


User provided reference genes

Program Settings