Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 8.8e-155 550.4 316 100.0
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 3.2e-120 435.6 263 84.0
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 2.9e-118 429.1 267 81.3
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 2.1e-116 422.9 242 87.6
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 2.0e-114 416.4 262 80.5
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 7.5e-114 414.5 262 80.2
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.0e-110 404.1 282 71.6
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.5e-109 400.2 286 69.9
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 4.3e-109 398.7 265 75.5
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 9.5e-109 397.5 262 73.7
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 2.1e-108 396.4 264 73.9
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 2.1e-108 396.4 262 76.3
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 6.2e-108 394.8 256 75.4
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 2.3e-107 392.9 262 72.5
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.0e-107 392.1 255 76.5
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 6.8e-107 391.3 261 74.7
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 1.2e-106 390.6 289 67.8
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 7.5e-106 387.9 261 73.9
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.2e-105 386.3 267 70.8
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.1e-104 384.0 264 71.6
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.9e-104 383.3 264 70.5
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 3.2e-104 382.5 263 70.3
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 4.6e-103 378.6 286 68.5
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 7.8e-103 377.9 265 69.8
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 1.0e-102 377.5 253 73.9
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 3.9e-102 375.6 259 70.3
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 5.1e-102 375.2 259 69.1
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 8.6e-102 374.4 259 69.9
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.1e-101 374.0 311 63.7
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 1.5e-101 373.6 262 70.2
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.3e-101 372.5 232 77.2
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.3e-101 372.1 257 72.4
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.6e-100 370.2 257 71.6
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.6e-100 370.2 260 69.2
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 2.8e-100 369.4 256 71.9
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 3.6e-100 369.0 260 70.0
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.1e-99 367.5 232 75.4
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.1e-99 367.5 265 69.1
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.8e-99 366.7 265 68.3
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 3.1e-99 365.9 261 70.5
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 3.1e-99 365.9 260 70.8
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 4.0e-99 365.5 260 68.5
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 5.2e-99 365.2 266 68.4
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 5.2e-99 365.2 268 68.3
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 6.8e-99 364.8 272 68.4
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.2e-98 364.0 231 79.2
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.2e-98 364.0 272 67.3
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.2e-98 364.0 263 67.7
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 2.0e-98 363.2 265 68.3
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 4.4e-98 362.1 260 68.5
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 5.8e-98 361.7 265 67.5
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 5.8e-98 361.7 227 76.7
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 7.6e-98 361.3 262 69.8
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 9.9e-98 360.9 267 67.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.2e-97 359.8 231 78.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 2.9e-97 359.4 251 68.9
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 8.3e-97 357.8 231 77.9
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 8.3e-97 357.8 240 71.7
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 3.2e-96 355.9 268 67.9
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.6e-95 353.6 250 68.8
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 6.0e-95 351.7 260 67.3
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 6.0e-95 351.7 262 67.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 7.8e-95 351.3 253 67.6
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.0e-94 350.9 264 65.2
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.3e-94 349.7 293 61.1
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.9e-94 349.0 267 64.4
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 1.1e-93 347.4 261 65.1
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 2.5e-93 346.3 238 68.5
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 3.3e-93 345.9 229 75.1
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 5.6e-93 345.1 254 64.6
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 7.3e-93 344.7 259 66.0
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 7.3e-93 344.7 232 73.3
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.6e-92 343.6 248 67.7
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 1.6e-92 343.6 258 65.1
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.6e-92 343.6 297 59.9
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 2.8e-92 342.8 253 66.0
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 8.1e-92 341.3 253 66.0
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.4e-91 340.5 258 67.4
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.8e-91 340.1 260 66.2
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 3.1e-91 339.3 258 65.1
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 3.1e-91 339.3 258 65.1
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 4.0e-91 339.0 253 65.2
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 4.0e-91 339.0 250 66.0
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 5.2e-91 338.6 251 66.1
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 8.9e-91 337.8 253 65.2
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 1.2e-90 337.4 258 64.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 3.4e-90 335.9 272 61.8
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 5.8e-90 335.1 264 63.6
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.7e-89 333.6 233 69.5
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 5.4e-88 328.6 250 66.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 2.1e-87 326.6 224 70.1
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 8.7e-86 321.2 258 63.2
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 2.5e-85 319.7 250 63.2
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 5.6e-85 318.5 258 62.0
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 4.8e-84 315.5 260 64.6
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 5.4e-80 302.0 231 64.1
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.0e-78 297.7 226 66.4
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 1.7e-78 297.0 289 57.8
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 6.6e-78 295.0 256 58.2
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 3.3e-77 292.7 250 56.8
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.3e-76 290.8 217 67.3
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.4e-72 277.3 235 62.6
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 1.8e-70 270.4 262 51.5
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 9.6e-69 264.6 229 59.0
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.8e-67 260.4 240 52.1
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.7e-63 246.5 210 56.2
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 3.4e-58 229.6 196 59.7
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.7e-57 227.3 148 76.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 3.8e-57 226.1 245 48.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 3.4e-50 203.0 215 48.8
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 5.9e-26 122.5 221 36.2
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.5e-24 117.9 122 54.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.2e-21 108.2 96 60.4
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 1.9e-16 90.9 226 28.3
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 2.6e-13 80.5 64 56.2
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 2.6e-13 80.5 64 56.2
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 1.2e-07 61.6 232 26.3


User provided reference genes

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