Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2545.4 1282 100.0
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2416.3 1285 94.2
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2411.7 1298 93.5
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2408.6 1285 94.0
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2408.3 1288 94.1
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2323.1 1287 90.1
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2314.7 1283 89.5
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2304.2 1287 90.8
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2303.9 1287 89.0
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2301.6 1283 89.0
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2297.7 1283 88.9
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2297.3 1283 88.8
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2295.8 1298 88.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2293.5 1287 89.1
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2292.3 1287 89.0
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2289.2 1284 88.9
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2287.3 1285 88.2
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2270.4 1283 88.6
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2261.5 1292 87.5
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2259.6 1283 87.8
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2253.8 1285 86.8
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2252.6 1285 87.1
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2240.3 1283 86.4
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2238.4 1286 86.7
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2233.0 1285 86.5
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2228.8 1285 86.8
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2226.1 1285 86.8
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2226.1 1301 85.5
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2222.6 1288 86.5
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2221.8 1301 85.2
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2219.9 1288 86.3
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2215.7 1294 86.1
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2212.6 1322 84.9
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2206.8 1292 86.0
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2199.9 1291 85.8
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2191.8 1283 85.7
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2190.6 1295 84.2
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2190.6 1288 85.4
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2187.9 1288 84.2
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2181.4 1283 84.1
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2180.6 1283 84.2
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2180.6 1285 84.7
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2177.9 1287 84.0
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2173.3 1288 84.1
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2172.1 1282 84.7
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2171.4 1284 84.0
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2171.4 1285 84.3
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2169.8 1288 83.2
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2167.9 1287 85.3
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2167.5 1288 83.2
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2167.5 1283 83.6
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2166.3 1293 83.4
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2164.0 1288 83.5
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2161.3 1300 83.4
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2155.9 1307 84.2
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2153.6 1296 82.9
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2153.6 1311 83.4
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2152.1 1284 83.1
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2147.5 1288 82.8
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2142.9 1289 83.7
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2142.5 1288 83.2
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2138.6 1287 83.1
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2136.3 1287 82.7
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2136.3 1286 83.0
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2126.3 1286 82.7
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2122.8 1296 82.1
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2114.7 1294 82.2
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2108.6 1287 81.6
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2079.3 1297 80.6
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2048.9 1415 75.3
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2035.8 1213 82.9
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2029.6 1545 69.8
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1993.8 1173 84.1
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1973.7 1219 80.2
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1946.8 1286 77.4
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1915.6 1287 73.7
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1889.0 1289 72.8
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1801.2 1315 71.8
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1791.5 939 94.2
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1656.3 960 87.1
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1649.8 955 87.1
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1610.1 837 95.5
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1603.6 1069 77.5
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1598.9 907 86.5
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1585.9 935 82.9
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1564.7 911 85.4
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1548.5 1209 65.6
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1541.9 910 83.2
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1537.7 909 82.8
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1522.3 1291 59.7
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1509.6 1288 58.5
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1508.4 1178 66.5
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1494.2 1328 56.7
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1473.0 1286 57.2
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1460.7 911 79.3
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1414.1 951 74.9
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1335.1 1309 52.6
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1318.9 916 71.0
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1132.9 687 84.0
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 5.0e-257 892.1 827 58.4
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 2.5e-256 889.8 803 60.5
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 1.1e-235 821.2 476 88.4
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 7.8e-226 788.5 451 90.5
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 9.2e-211 738.4 499 76.4
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 2.8e-199 700.3 549 67.6
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 5.1e-185 652.9 355 94.6
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.8e-177 627.9 350 91.4
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.6e-175 621.3 420 73.1
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 8.4e-172 609.0 348 89.7
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 1.5e-168 598.2 348 87.9
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.5e-165 588.2 451 65.9
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 2.7e-162 577.4 335 83.0
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 4.6e-162 576.6 349 84.5
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 5.1e-161 573.2 349 84.8
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 5.0e-156 556.6 348 83.0
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 4.8e-151 540.0 302 84.8
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.6e-149 534.3 383 70.5
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.2e-146 525.4 635 44.6
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 8.2e-143 512.7 423 68.6
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 2.5e-139 501.1 275 93.1
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 2.6e-128 464.5 261 90.4
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 2.8e-127 461.1 410 59.8
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.8e-126 458.4 302 74.5
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 3.0e-121 441.0 243 88.5
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 8.6e-116 422.9 276 81.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 5.0e-108 397.1 260 81.2
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.2e-104 386.0 348 60.3
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 3.4e-104 384.4 263 80.6
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 4.6e-85 320.9 264 60.2
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.0e-76 293.1 166 82.5
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 7.6e-72 276.9 469 33.0
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 9.3e-70 270.0 154 89.6
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 6.4e-63 247.3 423 39.5
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 4.8e-58 231.1 134 86.6
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 6.2e-58 230.7 133 84.2
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 4.0e-57 228.0 128 83.6
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 5.8e-56 224.2 127 89.8
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 3.2e-54 218.4 142 73.2
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 1.1e-51 209.9 119 84.0
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 9.7e-43 180.3 98 87.8
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.8e-42 178.7 127 66.9
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 6.3e-42 177.6 98 86.7
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 7.7e-40 170.6 164 54.9
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 1.0e-36 160.2 120 71.7
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.3e-34 153.3 126 68.3
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 3.7e-34 151.8 120 68.3
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.4e-33 149.8 113 67.3
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.5e-30 139.0 95 65.3
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.1e-27 130.2 72 83.3
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.6e-27 129.0 72 83.3
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.7e-26 126.3 85 68.2
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.4e-25 123.2 72 77.8
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 2.5e-22 112.5 73 74.0
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 4.7e-21 108.2 112 54.5
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 7.7e-16 90.9 54 85.2
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 5.5e-14 84.7 54 75.9
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 4.4e-11 75.1 77 50.6
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 2.7e-08 65.9 142 34.5
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 8.6e-07 60.8 34 79.4


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