Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G347000 Prunus persica HOM05D009218 ORTHO05D010069 7.5e-65 250.4 127 100.0
RcHm_v2.0_Chr3g0450331 Rosa chinensis HOM05D009218 ORTHO05D010069 2.5e-15 85.9 129 47.3
FAN14G1769 Fragaria x ananassa HOM05D009218 ORTHO05D010069 3.6e-14 82.0 135 45.9
FAN02G3090 Fragaria x ananassa HOM05D009218 ORTHO05D010069 4.6e-14 81.6 135 45.9
FAN05G0115 Fragaria x ananassa HOM05D009218 ORTHO05D010069 6.1e-14 81.3 133 44.4
FAN05G4900 Fragaria x ananassa HOM05D009218 ORTHO05D010069 6.1e-14 81.3 133 44.4
FvH4_6g02470 Fragaria vesca HOM05D009218 ORTHO05D010069 1.0e-13 80.5 135 45.2
FAN09G2898 Fragaria x ananassa HOM05D009218 ORTHO05D010069 1.0e-13 80.5 130 46.2
FAN14G5335 Fragaria x ananassa HOM05D009218 ORTHO05D010069 1.0e-13 80.5 135 45.2
Gorai.013G186400 Gossypium raimondii HOM05D009218 ORTHO05D010069 2.8e-11 72.4 117 43.6
Dinv05728 Davidia involucrata HOM05D009218 ORTHO05D010069 1.1e-10 70.5 137 39.4
Gohir.A13G168950 Gossypium hirsutum HOM05D009218 ORTHO05D010069 5.3e-10 68.2 129 39.5
Rhsim05G0175900 Rhododendron simsii HOM05D009218 ORTHO05D010069 3.4e-09 65.5 131 39.7
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 4.5e-09 65.1 119 41.2
Potri.019G013750 Populus trichocarpa HOM05D011447 ORTHO05D010069 7.7e-09 64.3 121 35.5
COL.COLO4_15410 Corchorus olitorius HOM05D009218 ORTHO05D010069 1.0e-08 63.9 137 35.8
Eucgr.H04261 Eucalyptus grandis HOM05D009218 ORTHO05D010069 1.7e-08 63.2 123 39.0
Manes.09G150100 Manihot esculenta HOM05D011447 ORTHO05D010069 2.9e-08 62.4 127 36.2
Potri.019G013300 Populus trichocarpa HOM05D011447 ORTHO05D010069 8.5e-08 60.8 124 36.3
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 8.5e-08 60.8 121 39.7
ClCG02G016910 Citrullus lanatus HOM05D009218 ORTHO05D010069 1.1e-07 60.5 99 44.4
QL03p029061 Quercus lobata HOM05D009218 ORTHO05D010069 3.2e-07 58.9 119 39.5
MELO3C004409.2 Cucumis melo HOM05D009218 ORTHO05D010069 4.2e-07 58.5 115 36.5
Manes.08G137000 Manihot esculenta HOM05D011447 ORTHO05D010069 4.2e-07 58.5 117 39.3
Sed0020224 Sechium edule HOM05D009218 ORTHO05D010069 5.5e-07 58.2 114 40.4
QL03p028359 Quercus lobata HOM05D009218 ORTHO05D010069 7.2e-07 57.8 119 38.7
Ciclev10022688m.g Citrus clementina HOM05D009218 ORTHO05D010069 9.4e-07 57.4 131 38.9
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 9.4e-07 57.4 72 51.4
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 9.4e-07 57.4 125 37.6
Gohir.D13G174325 Gossypium hirsutum HOM05D009218 ORTHO05D010069 1.2e-06 57.0 45 68.9
Cpa.g.sc162.8 Carica papaya HOM05D009218 ORTHO05D010069 1.6e-06 56.6 46 65.2
Sed0017066 Sechium edule HOM05D009218 ORTHO05D010069 2.1e-06 56.2 75 52.0
PGR004G0279 Punica granatum HOM05D011447 ORTHO05D010069 2.7e-06 55.8 57 54.4
CsaV3_2G003860 Cucumis sativus L. HOM05D009218 ORTHO05D010069 3.6e-06 55.5 118 35.6
CiPaw.07G070200 Carya illinoinensis HOM05D009218 ORTHO05D010069 4.7e-06 55.1 54 53.7
MELO3C004408.2 Cucumis melo HOM05D009218 ORTHO05D010069 4.7e-06 55.1 53 60.4
Nitab4.5_0000687g0100 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.7e-06 55.1 99 36.4
Manes.08G137100 Manihot esculenta HOM05D011447 ORTHO05D010069 6.1e-06 54.7 124 33.9
Nitab4.5_0008548g0020 Nicotiana tabacum HOM05D011340 ORTHO05D010069 6.1e-06 54.7 115 34.8
Sabra19G0016700 Salix brachista HOM05D011447 ORTHO05D010069 6.1e-06 54.7 50 56.0
Sabra19G0016800 Salix brachista HOM05D001365 ORTHO05D010069 6.1e-06 54.7 50 56.0
Sabra19G0016900 Salix brachista HOM05D011447 ORTHO05D010069 6.1e-06 54.7 50 56.0
Sabra19G0026300 Salix brachista HOM05D011447 ORTHO05D010069 6.1e-06 54.7 50 56.0
Thecc.05G277300 Theobroma cacao HOM05D009218 ORTHO05D010069 7.9e-06 54.3 65 53.8


User provided reference genes

Program Settings