Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 9.8e-291 1002.7 480 100.0
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 2.1e-261 905.2 483 89.6
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 3.2e-257 891.3 480 88.3
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.9e-254 882.1 480 87.5
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.3e-254 880.2 480 87.1
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.8e-253 878.2 480 86.9
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.4e-252 875.9 480 86.7
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.4e-252 875.2 480 86.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.9e-250 867.5 480 86.2
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 3.0e-247 858.2 487 83.6
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.8e-244 849.0 489 82.2
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 8.4e-242 840.1 481 83.2
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 9.3e-241 836.6 481 82.7
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.1e-238 829.7 496 78.8
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.9e-238 828.9 496 78.8
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 5.6e-238 827.4 487 81.1
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 7.4e-238 827.0 488 80.5
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.3e-237 826.2 488 80.1
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.3e-237 826.2 486 80.9
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 3.7e-237 824.7 484 79.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 4.8e-237 824.3 481 80.2
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 8.2e-237 823.5 486 80.9
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 1.4e-236 822.8 491 80.2
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.8e-236 822.4 486 80.0
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 2.4e-236 822.0 492 78.3
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 6.9e-236 820.5 481 80.7
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 9.0e-236 820.1 480 80.8
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.5e-235 819.3 575 69.7
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 2.0e-235 818.9 480 79.6
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.6e-235 818.5 488 79.1
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.6e-235 818.5 485 80.8
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 4.5e-235 817.8 480 78.8
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 4.5e-235 817.8 485 79.0
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.8e-235 817.4 485 79.8
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.0e-234 816.6 485 78.8
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 1.0e-234 816.6 480 79.8
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.7e-234 815.8 480 80.6
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 2.2e-234 815.5 484 80.6
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 8.4e-234 813.5 485 80.2
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 3.2e-233 811.6 484 78.7
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.2e-233 811.2 499 78.8
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 7.1e-233 810.4 483 78.9
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 9.3e-233 810.1 483 79.1
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 2.7e-232 808.5 488 78.3
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 6.0e-232 807.4 482 79.0
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.0e-231 806.6 488 78.3
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.3e-231 806.2 511 76.7
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 3.3e-230 801.6 480 79.2
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 7.4e-230 800.4 519 74.2
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 9.7e-230 800.0 485 77.9
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.3e-229 799.7 486 78.0
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.3e-229 799.7 480 77.7
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.8e-228 795.8 485 77.1
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.4e-228 795.4 469 79.3
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 3.1e-228 795.0 492 76.4
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 6.9e-228 793.9 492 76.4
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 6.9e-228 793.9 492 77.0
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 2.6e-227 792.0 480 78.3
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.7e-227 790.4 461 81.6
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.3e-226 789.6 465 79.4
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 1.7e-226 789.3 480 76.9
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.7e-226 789.3 492 76.4
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 1.7e-226 789.3 481 77.8
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 4.6e-224 781.2 573 67.5
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.4e-223 779.6 485 75.5
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.8e-223 779.2 482 76.6
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 8.8e-223 776.9 484 75.8
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 8.8e-223 776.9 480 75.2
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 5.7e-222 774.2 480 77.1
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 9.7e-222 773.5 484 74.8
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 1.8e-220 769.2 474 76.6
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 2.4e-220 768.8 485 74.8
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 1.5e-219 766.1 480 74.6
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.6e-219 765.4 488 74.4
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 2.6e-219 765.4 480 73.8
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 5.9e-219 764.2 489 73.8
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.0e-218 763.5 487 74.3
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 1.3e-218 763.1 481 75.3
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 1.7e-218 762.7 481 74.8
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 3.8e-218 761.5 480 74.6
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.9e-217 759.2 489 73.0
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 4.2e-217 758.1 480 73.5
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 5.5e-217 757.7 480 74.0
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 2.1e-216 755.7 564 66.5
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.7e-216 755.4 480 73.8
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.0e-215 753.4 480 73.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 7.4e-214 747.3 480 72.3
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 9.7e-214 746.9 480 72.5
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 9.7e-214 746.9 480 72.5
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 2.8e-213 745.3 480 72.5
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 3.7e-213 745.0 480 72.3
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 3.7e-213 745.0 480 72.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.2e-211 740.0 480 71.5
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 2.0e-211 739.2 480 75.8
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 7.7e-211 737.3 412 83.7
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 3.2e-209 731.9 504 69.0
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 5.2e-207 724.5 482 70.5
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 7.4e-206 720.7 569 63.3
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 4.8e-205 718.0 418 81.3
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.8e-204 716.1 540 65.9
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 5.9e-203 711.1 594 60.6
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 5.2e-199 698.0 480 69.2
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 8.8e-199 697.2 489 68.5
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 1.7e-197 693.0 504 66.9
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.9e-194 682.2 447 74.0
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.0e-186 657.1 374 82.6
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 5.0e-186 654.8 428 72.4
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.0e-183 647.1 419 71.8
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 4.4e-182 641.7 484 64.5
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 2.8e-181 639.0 361 83.1
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 3.5e-179 632.1 493 60.4
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 3.5e-179 632.1 485 62.5
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.7e-171 605.9 373 74.5
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.3e-170 602.8 328 86.9
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.5e-169 600.1 373 74.0
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 1.2e-166 590.5 342 80.1
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 9.8e-166 587.4 328 84.1
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 6.4e-165 584.7 530 55.3
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 2.4e-164 582.8 328 82.6
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 8.4e-149 531.2 334 75.7
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 1.9e-148 530.0 329 76.9
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 2.4e-148 529.6 325 76.6
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.7e-146 523.5 417 64.0
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 5.1e-146 521.9 361 69.5
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-143 513.5 296 80.4
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.4e-132 477.2 328 71.0
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.8e-109 399.4 222 82.4
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 1.7e-101 374.0 445 44.3
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.4e-100 370.9 439 44.6
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.1e-95 354.8 211 78.7
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 1.0e-90 338.2 227 69.2
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 2.3e-90 337.0 429 42.9
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.5e-81 307.8 187 77.5
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-79 301.2 159 86.8
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-79 301.2 159 86.8
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.5e-77 292.4 159 85.5
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.8e-67 260.4 145 80.0
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.8e-59 233.8 430 35.3
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.9e-47 194.5 106 85.8
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.6e-46 191.4 106 83.0
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-44 185.3 94 92.6
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.3e-44 183.7 93 92.5
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 7.1e-39 166.0 138 55.8
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-38 164.9 119 68.9
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.6e-37 159.1 91 81.3
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 6.4e-24 116.3 67 79.1
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.1e-23 112.8 76 72.4
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.5e-20 105.1 65 70.8
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.8e-19 100.9 71 73.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 4.8e-19 100.1 87 56.3
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 2.9e-16 90.9 70 67.1
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 1.4e-10 72.0 122 39.3
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 6.5e-08 63.2 125 36.0


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