Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.8e-191 671.8 334 100.0
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 5.1e-137 491.5 314 80.9
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.1e-134 483.8 313 79.2
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 7.6e-133 477.6 315 78.4
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.2e-132 476.1 315 78.7
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 3.5e-130 468.8 315 76.8
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 6.7e-129 464.5 314 77.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.9e-128 463.0 314 77.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.5e-125 453.4 331 74.3
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 2.2e-124 449.5 321 73.8
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.2e-122 443.7 313 72.8
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 2.7e-122 442.6 313 71.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 9.7e-120 434.1 315 71.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.4e-118 429.5 320 69.7
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 4.1e-118 428.7 317 70.0
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.3e-118 428.3 313 68.7
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 9.1e-118 427.6 320 69.4
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.2e-117 427.2 322 68.9
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 7.7e-117 424.5 323 68.4
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.3e-116 423.7 314 69.7
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.4e-115 420.2 319 69.0
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.5e-115 419.5 317 69.1
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.2e-114 417.2 313 67.4
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.1e-114 414.8 318 66.7
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.3e-113 412.9 313 66.8
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 5.1e-113 411.8 310 67.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 6.7e-113 411.4 313 68.1
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.1e-112 410.6 323 67.5
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.5e-112 410.2 313 66.1
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.4e-112 408.7 313 65.8
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 4.4e-112 408.7 306 67.0
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.3e-111 407.1 314 66.2
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.3e-111 407.1 331 64.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.7e-111 406.8 314 66.2
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.2e-111 406.4 314 66.6
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 4.8e-111 405.2 309 67.0
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.4e-110 403.7 280 70.0
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.8e-110 403.3 317 67.2
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.4e-110 402.9 271 73.4
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.1e-110 402.5 318 66.0
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.1e-110 402.5 315 66.3
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.3e-110 401.7 309 67.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.0e-110 401.4 316 65.2
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.2e-109 400.6 316 66.5
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.6e-109 399.4 271 72.0
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 4.5e-109 398.7 279 70.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 7.7e-109 397.9 311 64.6
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.3e-108 397.1 309 65.7
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 2.9e-108 396.0 343 63.8
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 5.0e-108 395.2 298 66.4
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 8.5e-108 394.4 331 64.4
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.1e-107 394.0 311 66.9
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.1e-107 394.0 311 65.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.9e-107 393.3 319 64.6
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.2e-107 392.5 272 69.5
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 5.5e-107 391.7 307 66.8
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 9.4e-107 391.0 309 64.1
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 9.4e-107 391.0 311 66.2
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.2e-106 390.6 322 65.2
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.2e-106 390.6 315 64.4
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-106 390.2 272 68.4
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.6e-106 390.2 267 70.4
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.1e-106 389.8 280 69.3
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.1e-106 389.8 315 65.7
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.3e-105 386.3 312 63.8
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 2.3e-105 386.3 271 70.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 3.0e-105 386.0 317 65.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.1e-104 384.0 296 65.2
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.0e-104 383.3 315 63.2
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.8e-103 379.4 318 63.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 3.1e-102 375.9 333 58.3
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 5.3e-102 375.2 253 72.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.0e-101 373.2 292 65.4
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 4.5e-101 372.1 333 57.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.7e-100 370.2 268 68.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.7e-100 370.2 272 66.2
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.7e-100 370.2 315 63.5
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 7.2e-99 364.8 317 61.8
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 9.4e-99 364.4 317 61.8
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.2e-98 364.0 324 62.0
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.8e-97 360.1 252 76.2
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 4.0e-97 359.0 270 65.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 4.0e-97 359.0 310 61.6
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.2e-97 358.6 258 67.8
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 4.4e-96 355.5 311 62.1
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 4.4e-96 355.5 311 62.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 4.4e-96 355.5 304 62.8
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.3e-95 354.0 313 61.0
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-95 353.6 315 59.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.2e-95 353.2 325 60.9
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.1e-94 350.9 292 57.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.1e-94 350.9 291 64.3
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.4e-94 349.7 315 61.6
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 3.8e-92 342.4 187 84.5
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.9e-91 340.1 294 60.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.6e-90 337.0 240 67.9
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.0e-88 330.1 258 63.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.1e-83 314.3 348 52.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.1e-82 310.1 282 58.2
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 3.0e-81 306.2 324 54.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.0e-76 289.7 330 49.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.6e-66 257.3 224 62.1
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.1e-65 254.6 210 60.5
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.4e-62 243.4 275 47.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.6e-61 240.7 223 50.7
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.7e-60 237.3 223 58.3
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.7e-60 237.3 269 46.8
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.5e-59 234.2 209 59.8
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 2.0e-56 223.8 286 42.7
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.6e-53 214.2 207 47.8
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 6.9e-49 198.7 275 43.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.9e-49 198.4 333 38.7
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 7.1e-46 188.7 164 56.7
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.5e-43 180.3 166 67.5
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.7e-39 167.5 318 35.8
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.7e-29 133.7 184 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.8e-25 120.9 108 52.8
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 5.9e-16 89.4 145 42.8
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.9e-12 76.6 167 37.7
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 5.7e-11 72.8 46 71.7
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 7.7e-08 62.4 91 42.9


User provided reference genes

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