Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 2.8e-174 615.1 305 100.0
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 1.8e-165 585.9 305 93.8
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 6.5e-163 577.4 307 92.5
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 9.7e-159 563.5 305 89.5
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 2.5e-154 548.9 305 87.2
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 2.8e-150 535.4 305 81.3
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.8e-149 532.7 304 85.9
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 2.4e-149 532.3 304 85.5
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 5.3e-149 531.2 305 83.0
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 4.5e-148 528.1 305 83.6
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 1.0e-147 526.9 309 80.9
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 6.5e-147 524.2 341 77.1
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 8.5e-147 523.9 304 82.2
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 2.3e-144 515.8 302 80.1
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 8.8e-144 513.8 314 81.5
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 4.4e-143 511.5 302 79.5
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 7.4e-143 510.8 297 80.1
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 1.3e-142 510.0 305 80.7
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.3e-142 510.0 302 79.8
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 2.8e-142 508.8 305 77.7
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 6.3e-142 507.7 305 79.7
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 8.2e-142 507.3 303 79.2
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 2.4e-141 505.8 303 78.5
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 3.1e-141 505.4 303 78.2
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 3.1e-141 505.4 308 77.9
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 5.3e-141 504.6 302 79.5
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 7.0e-141 504.2 303 79.5
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 2.6e-140 502.3 303 79.2
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 4.5e-140 501.5 298 78.9
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 7.7e-140 500.7 304 78.0
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 1.0e-139 500.4 302 77.8
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.0e-139 500.4 308 76.3
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 1.0e-139 500.4 302 78.8
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 1.3e-139 500.0 305 77.4
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 1.3e-139 500.0 302 78.8
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 1.3e-139 500.0 301 78.4
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 2.2e-139 499.2 309 77.7
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 2.9e-139 498.8 302 77.8
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 3.8e-139 498.4 303 78.2
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 6.5e-139 497.7 308 76.0
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 6.5e-139 497.7 302 77.8
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 8.5e-139 497.3 305 78.4
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 1.1e-138 496.9 304 78.3
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 3.2e-138 495.4 302 77.8
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 4.2e-138 495.0 302 77.5
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 1.6e-137 493.0 301 77.7
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 2.7e-137 492.3 301 79.4
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.0e-136 490.3 302 77.2
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 1.8e-136 489.6 302 76.8
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 2.3e-136 489.2 303 76.6
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 5.2e-136 488.0 305 74.4
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 8.8e-136 487.3 304 76.0
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 2.0e-135 486.1 303 76.9
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 4.4e-135 485.0 303 75.9
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 7.5e-135 484.2 307 75.2
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 7.5e-135 484.2 303 76.6
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 9.7e-135 483.8 301 76.1
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 2.2e-134 482.6 308 73.4
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 4.8e-134 481.5 302 76.5
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 6.3e-134 481.1 308 74.7
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 1.8e-133 479.6 303 73.9
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 2.4e-133 479.2 301 73.1
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 3.1e-133 478.8 308 73.7
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 5.3e-133 478.0 302 73.5
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 7.0e-133 477.6 302 74.8
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 1.6e-132 476.5 309 72.5
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 4.5e-132 474.9 308 73.1
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 2.9e-131 472.2 302 74.2
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 3.8e-131 471.9 302 73.8
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 3.8e-131 471.9 302 72.2
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 6.5e-131 471.1 329 69.0
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 6.5e-131 471.1 377 62.3
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 1.5e-130 469.9 304 73.7
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 2.5e-130 469.2 309 71.8
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 3.2e-130 468.8 304 72.4
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 4.2e-130 468.4 302 73.2
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 1.2e-129 466.8 310 71.9
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 1.6e-129 466.5 304 72.4
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 1.6e-129 466.5 373 63.3
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 2.7e-129 465.7 309 70.6
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 6.1e-129 464.5 307 71.3
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 6.1e-129 464.5 298 71.8
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 1.0e-128 463.8 307 71.0
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 1.0e-128 463.8 304 71.4
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 1.4e-128 463.4 308 70.5
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 1.8e-128 463.0 308 71.4
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 3.0e-128 462.2 309 70.6
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 5.2e-128 461.5 306 72.2
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 1.2e-127 460.3 309 70.9
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 1.2e-127 460.3 314 70.4
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 2.0e-127 459.5 301 73.4
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 2.6e-127 459.1 308 69.8
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 2.6e-127 459.1 308 70.5
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 3.4e-127 458.8 310 70.3
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 1.3e-126 456.8 307 70.0
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 3.7e-126 455.3 309 69.9
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 6.3e-126 454.5 307 69.7
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 1.4e-125 453.4 308 72.4
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 1.7e-123 446.4 305 72.5
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 2.7e-121 439.1 314 67.5
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 4.4e-119 431.8 303 71.0
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 4.9e-118 428.3 307 64.5
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 1.0e-115 420.6 271 73.8
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 8.6e-115 417.5 255 76.9
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 2.5e-114 416.0 297 65.3
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 3.6e-105 385.6 238 74.4
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 8.9e-104 380.9 201 90.5
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.2e-103 380.6 258 70.2
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 3.4e-103 379.0 265 66.4
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 4.7e-97 358.6 300 54.3
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.4e-93 347.1 302 56.3
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 6.0e-92 341.7 216 73.6
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 6.0e-92 341.7 291 57.0
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 5.1e-91 338.6 298 54.0
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 8.6e-91 337.8 261 64.8
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 7.1e-85 318.2 302 53.6
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 6.6e-83 311.6 177 82.5
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 8.1e-81 304.7 210 67.1
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 3.1e-80 302.8 177 79.7
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 6.4e-78 295.0 181 81.8
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 6.2e-73 278.5 237 56.1
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 5.8e-71 271.9 143 88.8
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 3.2e-69 266.2 179 72.6
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.5e-55 220.7 184 57.6
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 3.4e-55 219.5 126 84.9
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 2.5e-50 203.4 130 70.8
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 5.7e-50 202.2 170 55.3
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 2.9e-46 189.9 129 69.0
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 6.5e-46 188.7 130 70.0
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 4.2e-45 186.0 107 82.2
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 7.9e-44 181.8 105 84.8
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.1e-40 171.4 145 57.9
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 2.6e-34 150.2 101 68.3
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 4.1e-32 142.9 130 55.4
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.2e-31 141.4 130 56.2
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 4.4e-18 96.3 75 58.7
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 4.8e-17 92.8 52 75.0


User provided reference genes

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