Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 3.4e-83 311.6 157 100.0
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 3.8e-18 95.5 153 42.5
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 7.2e-17 91.3 121 45.5
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 1.3e-13 80.5 167 40.7
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 9.2e-12 74.3 90 44.4
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.2e-11 73.9 91 44.0
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 1.6e-11 73.6 96 45.8
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 5.9e-11 71.6 96 46.9
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 1.0e-10 70.9 93 45.2
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 1.3e-10 70.5 57 56.1
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 1.3e-10 70.5 48 62.5
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 1.7e-10 70.1 94 43.6
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 2.3e-10 69.7 93 45.2
Thecc.05G318400 Theobroma cacao HOM05D016798 ORTHO05D016261 8.6e-10 67.8 119 39.5
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.5e-09 67.0 67 50.7
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.9e-09 66.6 67 49.3
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 1.9e-09 66.6 90 45.6
FvH4_6g07020 Fragaria vesca HOM05D023588 ORTHO05D025400 2.5e-09 66.2 94 45.7
FAN14G1661 Fragaria x ananassa HOM05D023588 ORTHO05D025400 2.5e-09 66.2 94 45.7
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 5.6e-09 65.1 153 37.9
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 1.6e-08 63.5 93 43.0
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 2.1e-08 63.2 91 40.7
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 2.1e-08 63.2 90 44.4
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 3.6e-08 62.4 77 46.8
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 6.1e-08 61.6 35 71.4
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 6.1e-08 61.6 35 71.4
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 1.0e-07 60.8 71 45.1
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 1.4e-07 60.5 90 42.2
COL.COLO4_03800 Corchorus olitorius HOM05D016798 ORTHO05D016261 1.8e-07 60.1 42 66.7
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 1.8e-07 60.1 44 61.4
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 1.8e-07 60.1 44 61.4
FAN02G4419 Fragaria x ananassa HOM05D023588 ORTHO05D025400 3.0e-07 59.3 97 44.3
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 4.0e-07 58.9 109 37.6
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 6.8e-07 58.2 39 61.5
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 1.2e-06 57.4 39 61.5
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 1.2e-06 57.4 39 61.5
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 1.2e-06 57.4 39 61.5
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 1.2e-06 57.4 39 61.5
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 1.5e-06 57.0 60 48.3
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 1.5e-06 57.0 34 73.5
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 2.6e-06 56.2 70 42.9
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 3.4e-06 55.8 71 39.4
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 5.8e-06 55.1 39 56.4
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 5.8e-06 55.1 70 40.0
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 7.5e-06 54.7 36 61.1


User provided reference genes

Program Settings