Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G302300 Prunus persica HOM05D008878 ORTHO05D010972 1.4e-50 202.6 98 100.0
FAN05G4981 Fragaria x ananassa HOM05D008878 ORTHO05D010972 7.7e-33 143.7 92 81.5
FAN09G4214 Fragaria x ananassa HOM05D008878 ORTHO05D010972 2.9e-32 141.7 90 81.1
FAN02G1425 Fragaria x ananassa HOM05D008878 ORTHO05D010972 3.8e-32 141.4 92 80.4
FAN05G5213 Fragaria x ananassa HOM05D008878 ORTHO05D010972 5.0e-32 141.0 90 81.1
QL03p011407 Quercus lobata HOM05D008878 ORTHO05D010972 3.3e-28 128.3 96 72.9
Phvul.007G206900 Phaseolus vulgaris HOM05D008878 ORTHO05D010972 6.5e-24 114.0 96 59.4
Cfa004402 Carpinus fangiana HOM05D008878 ORTHO05D010972 2.5e-23 112.1 96 63.5
Glyma.20G089900 Glycine max HOM05D008878 ORTHO05D010972 4.2e-23 111.3 96 57.3
Glyma.10G141300 Glycine max HOM05D008878 ORTHO05D010972 5.5e-23 110.9 96 57.3
Eucgr.H01348 Eucalyptus grandis HOM05D008878 ORTHO05D010972 9.4e-23 110.2 96 59.4
Lalb_Chr02g0147361 Lupinus albus HOM05D008878 ORTHO05D010972 1.4e-21 106.3 96 54.2
Lj5g0023056 Lotus japonicus HOM05D008878 ORTHO05D010972 8.2e-19 97.1 98 57.1
Medtr1g085190 Medicago truncatula HOM05D008878 ORTHO05D010972 4.1e-18 94.7 96 54.2
Manes.08G105922 Manihot esculenta HOM05D008878 ORTHO05D010972 9.1e-18 93.6 106 55.7
TPR.G3072 Trifolium pratense HOM05D008878 ORTHO05D010972 3.5e-17 91.7 97 54.6
Hma1.2p1_0052F.1_g030230 Hydrangea macrophylla HOM05D008878 ORTHO05D010972 3.8e-16 88.2 100 47.0
Psat6g156760 Pisum sativum HOM05D008878 ORTHO05D010972 6.5e-16 87.4 96 51.0
Lsat_1_v5_gn_5_146741 Lactuca sativa HOM05D008878 ORTHO05D010972 7.2e-15 84.0 102 49.0
Nitab4.5_0000081g0040 Nicotiana tabacum HOM05D008878 ORTHO05D010972 7.2e-15 84.0 94 50.0
DCAR_022332 Daucus carota HOM05D008878 ORTHO05D010972 2.1e-14 82.4 90 50.0
Nitab4.5_0010076g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 2.1e-14 82.4 94 51.1
Peaxi162Scf00035g00092 Petunia axillaris HOM05D008878 ORTHO05D010972 2.7e-14 82.0 99 51.5
Nitab4.5_0006193g0030 Nicotiana tabacum HOM05D008878 ORTHO05D010972 4.0e-13 78.2 93 53.8
Rhsim11G0107100 Rhododendron simsii HOM05D008878 ORTHO05D010972 4.0e-13 78.2 104 50.0
Actinidia11704 Actinidia chinensis HOM05D008878 ORTHO05D010972 1.5e-12 76.3 95 49.5
Nitab4.5_0004090g0010 Nicotiana tabacum HOM05D008878 ORTHO05D010972 9.8e-12 73.6 94 51.1
Oeu033223.1 Olea europaea HOM05D008878 ORTHO05D010972 9.8e-12 73.6 90 47.8
Solyc01g102420.1 Solanum lycopersicum HOM05D008878 ORTHO05D010972 9.8e-12 73.6 99 47.5
PGSC0003DMG400018274 Solanum tuberosum HOM05D008878 ORTHO05D010972 1.4e-10 69.7 92 47.8
Sopen01g044870 Solanum pennellii HOM05D008878 ORTHO05D010972 3.1e-10 68.6 92 47.8
Potri.005G001001 Populus trichocarpa HOM05D008878 ORTHO05D010972 5.4e-10 67.8 68 58.8
Ciclev10029949m.g Citrus clementina HOM05D008878 ORTHO05D010972 1.6e-09 66.2 89 51.7
Lsat_1_v5_gn_9_83921 Lactuca sativa HOM05D008878 ORTHO05D010972 5.9e-09 64.3 100 37.0
TAR365G0428 Trochodendron aralioides HOM05D008878 ORTHO05D010972 2.9e-08 62.0 98 42.9
EL10Ac6g15322 Beta vulgaris HOM05D059084 ORTHO05D010972 6.5e-08 60.8 107 40.2
Actinidia11703 Actinidia chinensis HOM05D008878 ORTHO05D010972 8.5e-08 60.5 67 53.7
Migut.B00909 Erythranthe guttata HOM05D008878 ORTHO05D010972 2.1e-06 55.8 96 39.6
AUR62017867 Chenopodium quinoa HOM05D059084 ORTHO05D010972 4.7e-06 54.7 108 35.2


User provided reference genes

Program Settings