Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G302100 Prunus persica HOM05D007325 ORTHO05D009251 1.5e-68 262.7 132 100.0
MD12G1197000 Malus domestica HOM05D007325 ORTHO05D009251 1.4e-50 203.0 132 80.3
MD04G1183600 Malus domestica HOM05D007325 ORTHO05D009251 5.1e-48 194.5 132 77.3
RcHm_v2.0_Chr3g0459051 Rosa chinensis HOM05D007325 ORTHO05D009251 2.3e-32 142.5 136 60.3
FAN09G1210 Fragaria x ananassa HOM05D007325 ORTHO05D009251 1.0e-27 127.1 138 58.0
FAN02G3982 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.2e-27 125.9 138 57.2
FAN05G0265 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.2e-27 125.9 138 57.2
FAN05G4266 Fragaria x ananassa HOM05D007325 ORTHO05D009251 2.2e-27 125.9 138 57.2
FvH4_6g08790 Fragaria vesca HOM05D007325 ORTHO05D009251 3.6e-25 118.6 136 55.9
CANSAT54G2629 Cannabis sativa HOM05D007325 ORTHO05D009251 9.7e-23 110.5 143 53.1
Phvul.001G220700 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 1.4e-21 106.7 100 62.0
Lj5g0004840 Lotus japonicus HOM05D007325 ORTHO05D009251 1.2e-20 103.6 121 57.9
Potri.005G000700 Populus trichocarpa HOM05D007325 ORTHO05D009251 2.0e-20 102.8 126 56.3
VMungo1383G0662 Vigna mungo HOM05D007325 ORTHO05D009251 2.6e-20 102.4 124 56.5
Thecc.05G331600 Theobroma cacao HOM05D007325 ORTHO05D009251 2.9e-19 99.0 95 63.2
Glyma.03G226900 Glycine max HOM05D007325 ORTHO05D009251 3.8e-19 98.6 121 52.1
PGSC0003DMG400018232 Solanum tuberosum HOM05D007325 ORTHO05D009251 5.0e-19 98.2 94 60.6
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 1.9e-18 96.3 95 62.1
Psat6g156800 Pisum sativum HOM05D007325 ORTHO05D009251 4.2e-18 95.1 95 64.2
Cc02_g36910 Coffea canephora HOM05D007325 ORTHO05D009251 2.1e-17 92.8 98 58.2
TPR.G3077 Trifolium pratense HOM05D007325 ORTHO05D009251 3.6e-17 92.0 101 58.4
FAN14G5110 Fragaria x ananassa HOM05D007325 ORTHO05D009251 8.0e-17 90.9 107 58.9
Lalb_Chr02g0147341 Lupinus albus HOM05D007325 ORTHO05D009251 1.4e-16 90.1 116 53.4
Manes.08G105900 Manihot esculenta HOM05D007325 ORTHO05D009251 1.8e-16 89.7 129 47.3
arahy.Tifrunner.gnm1.ann1.Y42B53 Arachis hypogaea HOM05D007325 ORTHO05D009251 2.3e-16 89.4 114 52.6
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 3.0e-16 89.0 122 51.6
Lj5P313T22 Lonicera japonica HOM05D007325 ORTHO05D009251 3.0e-16 89.0 92 54.3
Gohir.D13G117300 Gossypium hirsutum HOM05D007325 ORTHO05D009251 5.2e-16 88.2 107 58.9
Gohir.A13G114400 Gossypium hirsutum HOM05D007325 ORTHO05D009251 6.7e-16 87.8 107 58.9
Lalb_Chr04g0260261 Lupinus albus HOM05D007325 ORTHO05D009251 6.7e-16 87.8 109 53.2
Lj9P239T47 Lonicera japonica HOM05D007325 ORTHO05D009251 1.5e-15 86.7 72 69.4
Sopen01g044880 Solanum pennellii HOM05D007325 ORTHO05D009251 2.0e-15 86.3 95 55.8
Glyma.20G089800 Glycine max HOM05D007325 ORTHO05D009251 4.4e-15 85.1 98 54.1
Lalb_Chr21g0309941 Lupinus albus HOM05D007325 ORTHO05D009251 4.4e-15 85.1 99 53.5
Gorai.013G131900 Gossypium raimondii HOM05D007325 ORTHO05D009251 5.7e-15 84.7 107 57.9
Atru.chr12.1499 Acer truncatum HOM05D007325 ORTHO05D009251 2.8e-14 82.4 121 48.8
CSS0011097 Camellia sinensis var. sinensis HOM05D007325 ORTHO05D009251 2.8e-14 82.4 88 58.0
Lalb_Chr06g0167201 Lupinus albus HOM05D007325 ORTHO05D009251 3.7e-14 82.0 95 53.7
Manes.09G182800 Manihot esculenta HOM05D007325 ORTHO05D009251 3.7e-14 82.0 119 52.1
Sp3g04850 Schrenkiella parvula HOM05D007325 ORTHO05D009251 3.7e-14 82.0 112 50.9
Potri.005G000401 Populus trichocarpa HOM05D007325 ORTHO05D009251 4.8e-14 81.6 104 50.0
Ciclev10030031m.g Citrus clementina HOM05D007325 ORTHO05D009251 6.3e-14 81.3 85 56.5
Eucgr.H01350 Eucalyptus grandis HOM05D007325 ORTHO05D009251 8.2e-14 80.9 93 55.9
Thhalv10022316m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 8.2e-14 80.9 108 51.9
THA.LOC104822290 Tarenaya hassleriana HOM05D007325 ORTHO05D009251 8.2e-14 80.9 104 50.0
Dinv30961 Davidia involucrata HOM05D007325 ORTHO05D009251 1.4e-13 80.1 91 56.0
Medtr1g085240 Medicago truncatula HOM05D007325 ORTHO05D009251 1.8e-13 79.7 99 54.5
Lj1g0016832 Lotus japonicus HOM05D007325 ORTHO05D009251 2.4e-13 79.3 126 44.4
Glyma.19G223800 Glycine max HOM05D007325 ORTHO05D009251 3.1e-13 79.0 90 55.6
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 3.1e-13 79.0 116 50.0
Glyma.10G141100 Glycine max HOM05D007325 ORTHO05D009251 1.2e-12 77.0 61 65.6
QL03p011419 Quercus lobata HOM05D007325 ORTHO05D009251 1.6e-12 76.6 59 69.5
Oeu061920.1 Olea europaea HOM05D007325 ORTHO05D009251 3.5e-12 75.5 110 49.1
Phvul.007G207000 Phaseolus vulgaris HOM05D007325 ORTHO05D009251 5.9e-12 74.7 85 57.6
TWI14G0425 Tripterygium wilfordii HOM05D007325 ORTHO05D009251 7.7e-12 74.3 77 63.6
HanXRQChr04g0108581 Helianthus annuus HOM05D007325 ORTHO05D009251 2.2e-11 72.8 101 49.5
Medtr7g111170 Medicago truncatula HOM05D007325 ORTHO05D009251 2.9e-11 72.4 121 47.1
BcaC01g04310 Brassica carinata HOM05D007325 ORTHO05D009251 5.0e-11 71.6 85 54.1
C03p41860 Brassica napus HOM05D007325 ORTHO05D009251 5.0e-11 71.6 85 54.1
BolC3t16469H Brassica oleracea HOM05D007325 ORTHO05D009251 5.0e-11 71.6 85 54.1
Carub.0006s2420 Capsella rubella HOM05D007325 ORTHO05D009251 5.0e-11 71.6 116 49.1
Medtr7g111180 Medicago truncatula HOM05D007325 ORTHO05D009251 6.5e-11 71.2 96 52.1
Lalb_Chr15g0077801 Lupinus albus HOM05D007325 ORTHO05D009251 8.5e-11 70.9 94 47.9
Migut.B00680 Erythranthe guttata HOM05D007325 ORTHO05D009251 1.5e-10 70.1 92 48.9
CARHR080420 Cardamine hirsuta HOM05D007325 ORTHO05D009251 1.9e-10 69.7 106 46.2
AL3G16720 Arabidopsis lyrata HOM05D007325 ORTHO05D009251 2.5e-10 69.3 85 55.3
arahy.Tifrunner.gnm1.ann1.GPC6YY Arachis hypogaea HOM05D007325 ORTHO05D009251 2.5e-10 69.3 68 57.4
TAR365G1009 Trochodendron aralioides HOM05D007325 ORTHO05D009251 2.5e-10 69.3 106 46.2
Aa31LG5G16370 Aethionema arabicum HOM05D007325 ORTHO05D009251 4.2e-10 68.6 96 51.0
PGR119G2017 Punica granatum HOM05D007325 ORTHO05D009251 4.2e-10 68.6 134 39.6
TAR365G0322 Trochodendron aralioides HOM05D007325 ORTHO05D009251 7.2e-10 67.8 73 56.2
A05p42120 Brassica napus HOM05D007325 ORTHO05D009251 9.4e-10 67.4 113 46.0
ATR0693G152 Amborella trichopoda HOM05D007325 ORTHO05D009251 1.6e-09 66.6 76 47.4
BraA05t22930Z Brassica rapa HOM05D007325 ORTHO05D009251 3.6e-09 65.5 69 56.5
Carub.0003s0533 Capsella rubella HOM05D007325 ORTHO05D009251 3.6e-09 65.5 108 46.3
BraA03t12615Z Brassica rapa HOM05D007325 ORTHO05D009251 6.1e-09 64.7 112 46.4
BcaB04g19232 Brassica carinata HOM05D007325 ORTHO05D009251 8.0e-09 64.3 77 50.6
Thhalv10005170m.g Eutrema salsugineum HOM05D007325 ORTHO05D009251 8.0e-09 64.3 104 43.3
Eucgr.B01357 Eucalyptus grandis HOM05D007325 ORTHO05D009251 1.8e-08 63.2 142 41.5
BcaC05g30077 Brassica carinata HOM05D007325 ORTHO05D009251 2.3e-08 62.8 113 45.1
C05p61330 Brassica napus HOM05D007325 ORTHO05D009251 2.3e-08 62.8 113 45.1
BolC5t34792H Brassica oleracea HOM05D007325 ORTHO05D009251 2.3e-08 62.8 113 45.1
SGA_v2.0_scaffold131G34452 Striga asiatica HOM05D007325 ORTHO05D009251 4.0e-08 62.0 69 53.6
Oeu006910.1 Olea europaea HOM05D007325 ORTHO05D009251 5.2e-08 61.6 81 49.4
PGR031G0924 Punica granatum HOM05D007325 ORTHO05D009251 5.2e-08 61.6 95 47.4
MBI18_g03881_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 6.7e-08 61.2 68 50.0
Lsat_1_v5_gn_9_83741 Lactuca sativa HOM05D007325 ORTHO05D009251 8.8e-08 60.8 124 38.7
MBI18_g28938_MAGBIO Magnolia biondii HOM05D007325 ORTHO05D009251 1.2e-07 60.5 91 44.0
SalBow6G6911 Salvia bowleyana HOM05D007325 ORTHO05D009251 1.2e-07 60.5 94 46.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.5e-07 60.1 98 43.9
TPR.G8391 Trifolium pratense HOM05D007325 ORTHO05D009251 1.5e-07 60.1 117 42.7
A03p34390 Brassica napus HOM05D007325 ORTHO05D009251 2.0e-07 59.7 118 43.2
Psat0s4029g0040 Pisum sativum HOM05D007325 ORTHO05D009251 2.6e-07 59.3 92 45.7
Sp2g21390 Schrenkiella parvula HOM05D007325 ORTHO05D009251 5.7e-07 58.2 105 40.0
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 2.2e-06 56.2 75 45.3
Aa31LG11G10030 Aethionema arabicum HOM05D007325 ORTHO05D009251 4.8e-06 55.1 115 40.0


User provided reference genes

Program Settings