Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 7.6e-32 139.8 67 100.0
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.9e-30 135.2 66 95.5
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.1e-30 133.3 66 93.9
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 7.1e-30 133.3 66 93.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.6e-29 132.1 66 92.4
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.1e-29 131.7 65 93.8
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.7e-28 128.6 67 91.0
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 5.1e-28 127.1 62 95.2
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 3.3e-27 124.4 67 85.1
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 7.3e-27 123.2 65 84.6
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 9.6e-27 122.9 62 90.3
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 9.6e-27 122.9 67 83.6
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 9.6e-27 122.9 65 86.2
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.3e-26 122.5 61 91.8
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.6e-26 122.1 61 90.2
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.8e-26 121.3 67 83.6
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 2.8e-26 121.3 65 87.7
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 3.6e-26 120.9 65 83.1
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 3.6e-26 120.9 66 81.8
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 3.6e-26 120.9 66 81.8
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 66 78.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 4.8e-26 120.6 66 81.8
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 6.2e-26 120.2 65 81.5
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 6.2e-26 120.2 64 81.2
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 8.1e-26 119.8 65 81.5
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 8.1e-26 119.8 65 81.5
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 8.1e-26 119.8 65 83.1
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.1e-25 119.4 65 81.5
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.1e-25 119.4 65 81.5
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.1e-25 119.4 65 81.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.1e-25 119.4 67 82.1
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 1.1e-25 119.4 66 81.8
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 1.1e-25 119.4 65 83.1
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.4e-25 119.0 62 88.7
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.8e-25 118.6 67 83.6
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 2.4e-25 118.2 68 82.4
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 2.4e-25 118.2 67 79.1
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-25 117.9 65 80.0
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 3.1e-25 117.9 65 80.0
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 3.1e-25 117.9 65 78.5
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 3.1e-25 117.9 62 88.7
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 3.1e-25 117.9 63 85.7
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 3.1e-25 117.9 63 85.7
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 3.1e-25 117.9 67 80.6
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 5.3e-25 117.1 65 80.0
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 5.3e-25 117.1 65 80.0
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 5.3e-25 117.1 63 82.5
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 6.9e-25 116.7 64 82.8
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 9.0e-25 116.3 64 82.8
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 9.0e-25 116.3 67 83.6
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 9.0e-25 116.3 61 83.6
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 9.0e-25 116.3 69 78.3
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 9.0e-25 116.3 69 78.3
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 83.1
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 83.1
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 76.6
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.2e-24 115.9 67 79.1
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.5e-24 115.5 63 82.5
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 2.0e-24 115.2 66 80.3
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 4.5e-24 114.0 67 77.6
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 4.5e-24 114.0 63 77.8
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.7e-23 112.1 58 84.5
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.7e-23 112.1 60 83.3
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 80.6
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.7e-23 112.1 58 84.5
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 3.8e-23 110.9 65 75.4
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 6.4e-23 110.2 67 77.6
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.1e-22 109.4 61 77.0
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.4e-22 108.2 67 74.6
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 75.8
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 5.4e-22 107.1 63 74.6
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.2e-21 105.9 63 73.0
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 2.1e-21 105.1 55 85.5
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.1e-21 105.1 57 82.5
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.7e-21 104.8 54 87.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.8e-20 102.1 58 75.9
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 5.6e-19 97.1 66 66.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 5.6e-19 97.1 66 66.7
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 2.1e-18 95.1 62 69.4
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 3.4e-16 87.8 59 71.2
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 4.9e-15 84.0 65 63.1
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 3.2e-14 81.3 65 61.5
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 4.2e-14 80.9 48 79.2
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 2.3e-12 75.1 43 76.7
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 3.9e-12 74.3 40 80.0
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 7.4e-11 70.1 55 56.4
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 83.3
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.7e-10 67.8 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.7e-10 67.8 36 83.3
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.1e-09 66.2 38 73.7
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 53 50.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 3.1e-09 64.7 53 50.9
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 6.9e-09 63.5 55 49.1
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 2.0e-08 62.0 43 60.5


User provided reference genes

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