Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 3.9e-156 555.4 454 100.0
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.4e-89 334.3 238 77.3
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 1.9e-65 254.2 256 62.1
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 7.6e-59 232.3 255 58.4
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.9e-59 231.9 251 59.0
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.8e-58 229.9 255 58.8
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 4.9e-58 229.6 256 57.4
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 3.8e-50 203.4 249 52.6
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 3.2e-49 200.3 257 51.4
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 7.9e-48 195.7 238 56.3
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 2.3e-47 194.1 260 49.6
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 4.3e-46 189.9 233 50.2
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 7.6e-43 179.1 245 47.3
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.7e-42 177.9 242 47.1
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 2.2e-42 177.6 235 51.9
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.9e-42 176.4 241 48.5
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 6.5e-42 176.0 247 47.4
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 2.1e-40 171.0 248 48.8
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 2.3e-39 167.5 240 45.0
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.5e-38 164.9 247 45.3
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 3.3e-38 163.7 247 45.3
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 1.6e-37 161.4 263 44.5
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 1.6e-37 161.4 258 45.3
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 3.7e-37 160.2 231 47.6
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 3.7e-37 160.2 248 46.8
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.1e-36 158.7 247 46.6
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 2.4e-36 157.5 245 42.9
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 1.5e-35 154.8 238 45.4
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 2.0e-35 154.5 245 42.4
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.0e-35 154.5 249 43.8
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 3.4e-35 153.7 226 45.1
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.3e-34 151.8 266 41.0
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 5.0e-34 149.8 245 42.4
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 5.0e-34 149.8 273 40.3
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 5.0e-34 149.8 241 41.9
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 6.5e-34 149.4 239 45.2
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.1e-33 148.7 218 48.2
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 1.4e-33 148.3 221 45.7
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 5.5e-33 146.4 250 42.4
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 7.2e-33 146.0 191 49.7
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 2.7e-32 144.1 189 50.3
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.6e-32 143.7 217 47.0
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 4.6e-32 143.3 268 41.8
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 5.1e-31 139.8 221 46.2
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 5.1e-31 139.8 208 48.1
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 4.3e-30 136.7 220 44.5
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 1.3e-29 135.2 257 43.2
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.7e-29 134.8 249 41.0
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 2.8e-29 134.0 251 38.2
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 6.3e-29 132.9 260 41.2
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 8.2e-29 132.5 304 37.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.3e-28 129.8 241 39.0
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 5.3e-28 129.8 277 38.3
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.2e-27 128.6 239 38.9
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.2e-27 128.6 277 38.6
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.5e-27 128.3 201 45.3
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 2.0e-27 127.9 262 39.7
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 2.0e-27 127.9 260 41.5
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 2.6e-27 127.5 243 39.1
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 4.5e-27 126.7 244 41.0
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 4.5e-27 126.7 204 45.6
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 3.8e-26 123.6 239 39.7
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 3.8e-26 123.6 239 38.9
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 6.5e-26 122.9 238 40.3
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 8.5e-26 122.5 239 39.3
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 8.5e-26 122.5 239 39.3
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.1e-25 122.1 196 43.4
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 1.9e-25 121.3 319 35.1
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 3.2e-25 120.6 255 38.4
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 2.7e-24 117.5 207 45.4
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.8e-23 114.8 207 44.0
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.8e-23 114.8 262 38.2
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 5.1e-23 113.2 245 37.6
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.5e-22 111.7 261 35.6
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 2.6e-22 110.9 232 38.4
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 2.6e-22 110.9 276 35.9
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 7.4e-22 109.4 242 36.8
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.3e-21 108.6 267 36.3
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 8.2e-21 105.9 260 35.4
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.1e-20 105.5 244 36.1
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.1e-20 105.5 251 39.0
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.4e-20 105.1 219 39.7
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 2.0e-19 101.3 260 36.5
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.6e-19 100.9 261 33.3
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 7.7e-19 99.4 261 35.6
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 3.8e-18 97.1 243 35.4
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 6.5e-18 96.3 179 42.5
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.4e-17 95.1 287 34.1
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.9e-17 94.7 210 36.2
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 1.9e-17 94.7 206 40.8
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 4.2e-17 93.6 165 41.8
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 9.4e-17 92.4 240 36.2
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 5.2e-15 86.7 246 30.5
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.7e-13 81.6 260 32.3
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 4.8e-13 80.1 128 39.8
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 6.3e-13 79.7 130 39.2
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 5.0e-10 70.1 236 28.4
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 2.7e-08 64.3 92 50.0
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 3.6e-08 63.9 64 57.8
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.8e-07 61.6 120 42.5
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 1.8e-07 61.6 246 32.1
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 6.8e-07 59.7 89 41.6
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 6.8e-07 59.7 86 46.5
BolC3t14925H Brassica oleracea HOM05D006830 ORTHO05D008119 8.8e-07 59.3 96 43.8
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.2e-06 58.9 231 31.2


User provided reference genes

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