Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.4e-157 559.7 517 100.0
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 2.3e-72 277.3 516 73.8
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 8.9e-64 248.8 517 69.6
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 4.0e-56 223.4 519 67.4
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 5.6e-50 203.0 483 69.2
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.4e-48 197.6 190 56.3
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 6.9e-48 196.1 527 64.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.8e-46 190.3 413 73.8
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.0e-43 182.2 530 58.5
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 1.1e-40 172.2 522 62.8
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 7.9e-36 156.0 426 72.3
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 2.3e-35 154.5 471 60.3
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.1e-34 152.1 530 56.2
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 3.8e-30 137.1 524 48.7
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 8.4e-30 136.0 438 68.5
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 6.0e-28 129.8 484 62.8
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 7.9e-28 129.4 442 71.3
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.3e-27 128.6 469 59.1
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 1.3e-27 128.6 141 49.6
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 1.1e-24 119.0 111 54.1
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 6.9e-24 116.3 525 53.0
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 6.9e-24 116.3 186 39.8
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 9.0e-24 115.9 140 42.9
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.0e-23 114.8 409 66.7
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 2.6e-23 114.4 536 54.5
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 4.5e-23 113.6 530 54.5
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 3.8e-22 110.5 198 38.9
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 3.8e-22 110.5 475 61.5
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 3.8e-22 110.5 139 42.4
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 3.2e-21 107.5 158 39.2
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.7e-20 104.4 114 44.7
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 3.6e-20 104.0 506 52.4
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.0e-19 102.4 130 39.2
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 1.4e-19 102.1 185 37.3
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 1.8e-19 101.7 114 44.7
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.3e-19 101.3 136 41.2
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.5e-18 98.6 140 39.3
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 4.3e-18 97.1 138 36.2
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.7e-18 96.7 141 39.7
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.7e-18 96.7 141 39.7
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 7.4e-18 96.3 140 39.3
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 1.7e-17 95.1 140 38.6
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 2.2e-17 94.7 111 44.1
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.8e-17 94.4 136 37.5
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 3.7e-17 94.0 139 48.9
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.1e-16 92.4 475 64.0
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 2.4e-16 91.3 138 40.6
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 4.1e-16 90.5 139 37.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.5e-15 88.6 114 44.7
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 2.0e-15 88.2 101 44.6
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 2.6e-15 87.8 96 46.9
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 1.0e-14 85.9 97 50.5
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 1.3e-14 85.5 100 44.0
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.3e-14 85.5 137 38.0
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 1.3e-14 85.5 144 36.1
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.7e-14 85.1 141 39.0
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 3.8e-14 84.0 95 43.2
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.1e-13 82.4 132 37.9
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 1.4e-13 82.0 100 45.0
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 1.9e-13 81.6 70 57.1
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 2.5e-13 81.3 142 36.6
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 7.2e-13 79.7 140 44.3
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 1.6e-12 78.6 99 41.4
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 4.7e-12 77.0 140 33.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 7.9e-12 76.3 141 41.1
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.0e-11 75.9 99 41.4
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.0e-11 75.9 137 39.4
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 2.6e-10 71.2 78 48.7
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 9.7e-10 69.3 54 57.4
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 2.2e-09 68.2 125 34.4
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.2e-09 68.2 120 35.8
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 3.7e-09 67.4 57 56.1
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 4.8e-09 67.0 117 34.2
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 6.3e-09 66.6 137 38.0
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 6.3e-09 66.6 92 40.2
Eucgr.A00736 Eucalyptus grandis HOM05D007752 ORTHO05D009994 1.8e-08 65.1 56 51.8
MELO3C009102.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.7e-06 58.5 93 36.6
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 3.8e-06 57.4 118 33.1
CDE04G0575 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 8.5e-06 56.2 113 24.8


User provided reference genes

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