Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 2.5e-40 168.3 84 100.0
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 3.7e-36 154.5 84 92.9
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 1.1e-35 152.9 84 91.7
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 5.1e-09 64.3 48 64.6
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 9.6e-08 60.1 48 60.4
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.2e-07 59.7 48 60.4
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.2e-07 59.7 43 67.4
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.1e-07 58.9 62 48.4
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.1e-07 58.9 61 54.1
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.1e-07 58.9 43 62.8
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.1e-07 58.9 43 62.8
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.8e-07 58.5 46 58.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 3.6e-07 58.2 63 49.2
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.6e-07 58.2 37 75.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.7e-07 57.8 37 70.3
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 4.7e-07 57.8 54 55.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 6.2e-07 57.4 46 56.5
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 6.2e-07 57.4 48 54.2
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 6.2e-07 57.4 43 65.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 6.2e-07 57.4 43 65.1
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.4e-06 56.2 43 62.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.4e-06 56.2 49 57.1
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 1.4e-06 56.2 48 56.2
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.8e-06 55.8 37 73.0
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.4e-06 55.5 37 67.6
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 5.2e-06 54.3 48 54.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.0e-06 53.5 37 64.9
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 9.0e-06 53.5 43 58.1


User provided reference genes

Program Settings