Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.4e-69 266.2 138 100.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.3e-50 201.8 138 77.5
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 8.2e-49 197.2 139 78.4
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 7.7e-47 190.7 138 73.9
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.2e-45 184.9 141 73.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 5.5e-45 184.5 138 75.4
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.5e-45 184.5 138 75.4
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.4e-43 179.9 137 72.3
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.8e-43 179.5 138 73.9
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.8e-43 177.6 139 69.1
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.8e-43 177.2 138 71.7
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.5e-42 176.4 139 69.1
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.0e-42 176.0 106 83.0
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 7.5e-42 174.1 136 69.9
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.3e-41 173.3 136 67.6
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.7e-41 172.9 142 67.6
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 2.2e-41 172.6 139 68.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 3.7e-41 171.8 142 68.3
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 2.4e-40 169.1 99 84.8
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 5.4e-40 167.9 106 80.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 5.4e-40 167.9 108 77.8
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 9.1e-40 167.2 93 87.1
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 9.1e-40 167.2 136 66.9
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 9.1e-40 167.2 128 71.1
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.6e-39 166.4 130 70.0
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.6e-39 166.4 144 66.7
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.7e-39 165.6 136 66.2
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 2.7e-39 165.6 111 74.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.5e-39 165.2 134 63.4
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 3.5e-39 165.2 106 78.3
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 7.7e-39 164.1 131 66.4
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.0e-38 163.7 136 63.2
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.7e-38 162.9 90 85.6
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.7e-38 162.9 111 72.1
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 2.2e-38 162.5 122 69.7
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 2.9e-38 162.2 107 77.6
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.9e-38 162.2 92 84.8
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.8e-38 161.8 122 69.7
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 3.8e-38 161.8 94 83.0
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.8e-38 161.8 124 68.5
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 6.5e-38 161.0 90 84.4
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 8.5e-38 160.6 122 69.7
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.1e-37 160.2 93 82.8
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.9e-37 159.5 91 83.5
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.9e-37 159.5 115 70.4
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 4.2e-37 158.3 123 67.5
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 4.2e-37 158.3 102 77.5
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.5e-37 157.9 96 82.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 5.5e-37 157.9 102 81.4
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 5.5e-37 157.9 91 82.4
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 7.2e-37 157.5 133 63.9
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 7.2e-37 157.5 123 69.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 7.2e-37 157.5 146 57.5
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 7.2e-37 157.5 141 62.4
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 7.2e-37 157.5 133 64.7
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 9.4e-37 157.1 136 62.5
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.2e-36 156.8 100 75.0
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.1e-36 156.0 122 70.5
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 2.7e-36 155.6 137 63.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 3.6e-36 155.2 90 84.4
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 3.6e-36 155.2 107 74.8
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.1e-36 154.5 122 67.2
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 6.1e-36 154.5 140 62.1
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 8.0e-36 154.1 94 78.7
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 8.0e-36 154.1 94 78.7
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.0e-35 153.7 136 60.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.8e-35 152.9 92 80.4
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.8e-35 152.9 91 80.2
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.3e-35 152.5 89 80.9
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 3.0e-35 152.1 85 85.9
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 5.2e-35 151.4 114 68.4
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 5.2e-35 151.4 114 68.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 5.2e-35 151.4 114 68.4
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 5.2e-35 151.4 114 68.4
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 6.8e-35 151.0 103 73.8
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.2e-34 150.2 84 83.3
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.2e-34 150.2 84 83.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 2.0e-34 149.4 120 63.3
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.7e-34 147.9 114 67.5
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 5.7e-34 147.9 136 57.4
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 7.5e-34 147.5 125 63.2
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 7.5e-34 147.5 93 76.3
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 9.8e-34 147.1 83 81.9
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 9.8e-34 147.1 125 64.0
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.8e-33 145.6 82 84.1
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 3.7e-33 145.2 86 79.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 8.3e-33 144.1 91 73.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.1e-32 143.7 95 73.7
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.4e-32 143.3 82 84.1
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.4e-32 143.3 88 77.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 3.1e-32 142.1 82 84.1
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 3.1e-32 142.1 97 64.9
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 5.9e-31 137.9 115 64.3
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.9e-31 137.9 108 67.6
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.3e-30 136.7 82 79.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.9e-30 135.6 84 73.8
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.9e-30 135.6 83 78.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 3.8e-30 135.2 129 57.4
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.1e-29 133.7 120 60.0
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 7.2e-29 131.0 88 69.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 8.0e-28 127.5 85 74.1
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.5e-26 123.2 136 56.6
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 8.3e-25 117.5 88 65.9
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 4.9e-17 91.7 45 88.9
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 7.8e-15 84.3 83 54.2
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 3.7e-09 65.5 49 61.2
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 4.9e-09 65.1 39 79.5


User provided reference genes

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