Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 1.4e-47 192.6 95 100.0
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 3.8e-45 184.5 95 93.7
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 3.8e-45 184.5 95 94.7
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 4.4e-41 171.0 95 89.5
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 5.7e-41 170.6 95 89.5
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 9.7e-41 169.9 95 88.4
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 2.2e-40 168.7 95 87.4
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 2.2e-40 168.7 95 87.4
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 3.7e-40 167.9 95 88.4
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 3.7e-40 167.9 95 88.4
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 3.7e-40 167.9 95 88.4
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.4e-39 166.0 96 86.5
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 2.4e-39 165.2 95 85.3
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 5.3e-39 164.1 95 84.2
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 6.9e-39 163.7 95 85.3
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 6.9e-39 163.7 95 85.3
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 2.0e-38 162.2 95 84.2
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 2.6e-38 161.8 95 84.2
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 84.2
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 84.2
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 83.2
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 3.4e-38 161.4 95 84.2
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 4.5e-38 161.0 95 83.2
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 84.2
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 84.2
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 83.2
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 84.2
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 5.9e-38 160.6 95 84.2
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 7.7e-38 160.2 95 83.2
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.0e-37 159.8 95 83.2
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 83.2
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.3e-37 159.5 95 83.2
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 1.7e-37 159.1 95 82.1
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 82.1
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 83.2
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 83.2
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 83.2
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.2e-37 158.7 95 83.2
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 2.9e-37 158.3 95 82.1
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.9e-37 158.3 95 81.1
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 3.8e-37 157.9 94 80.9
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 3.8e-37 157.9 94 80.9
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 5.0e-37 157.5 94 78.7
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 5.0e-37 157.5 94 78.7
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 5.0e-37 157.5 94 78.7
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 5.0e-37 157.5 95 82.1
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 8.5e-37 156.8 95 81.1
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 81.1
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 1.1e-36 156.4 94 81.9
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 82.1
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 82.1
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 81.1
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 81.1
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.1e-36 156.4 95 82.1
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 1.4e-36 156.0 95 80.0
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 1.4e-36 156.0 95 81.1
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 81.1
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 81.1
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 81.1
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 81.1
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 82.1
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 80.0
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.5e-36 155.2 95 80.0
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 3.2e-36 154.8 95 80.0
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 81.1
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 4.2e-36 154.5 95 81.1
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 9.4e-36 153.3 95 80.0
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 1.2e-35 152.9 95 80.0
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 1.2e-35 152.9 95 77.9
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 1.2e-35 152.9 95 80.0
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 77.9
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 77.9
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.6e-35 152.5 95 80.0
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 77.9
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 78.9
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 77.9
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 80.0
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 78.9
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 77.9
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 77.9
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 2.1e-35 152.1 95 77.9
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 2.7e-35 151.8 95 80.0
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 3.6e-35 151.4 95 76.8
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 3.6e-35 151.4 95 76.8
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 3.6e-35 151.4 95 81.1
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 4.7e-35 151.0 95 77.9
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 4.7e-35 151.0 95 77.9
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 6.1e-35 150.6 95 78.9
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 1.0e-34 149.8 95 76.8
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.0e-34 149.8 95 78.9
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.0e-34 149.8 95 78.9
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.0e-34 149.8 95 77.9
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.4e-34 149.4 95 77.9
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.8e-34 149.1 95 77.9
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 1.8e-34 149.1 95 78.9
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 2.3e-34 148.7 95 77.9
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 3.0e-34 148.3 95 75.8
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 3.0e-34 148.3 95 76.8
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 5.2e-34 147.5 95 75.8
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 5.2e-34 147.5 95 78.9
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 8.8e-34 146.7 95 75.8
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 8.8e-34 146.7 95 73.7
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 8.8e-34 146.7 91 75.8
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 1.1e-33 146.4 95 78.9
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.1e-33 146.4 95 73.7
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.6e-33 145.2 95 74.7
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 2.6e-33 145.2 94 73.4
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 3.3e-33 144.8 118 66.1
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 4.4e-33 144.4 94 74.5
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 9.7e-33 143.3 95 73.7
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 9.7e-33 143.3 95 73.7
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 9.7e-33 143.3 95 73.7
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 9.7e-33 143.3 95 73.7
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 9.7e-33 143.3 95 73.7
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 1.3e-32 142.9 94 73.4
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.2e-32 142.1 95 73.7
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 2.2e-32 142.1 95 71.6
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 2.8e-32 141.7 95 73.7
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 2.8e-32 141.7 95 73.7
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 2.8e-32 141.7 95 73.7
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 2.8e-32 141.7 94 72.3
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 2.8e-32 141.7 94 72.3
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 4.8e-32 141.0 88 78.4
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 6.3e-32 140.6 88 73.9
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 8.2e-32 140.2 95 72.6
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.1e-31 139.8 94 72.3
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 1.8e-31 139.0 95 72.6
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 1.8e-31 139.0 95 72.6
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 3.1e-31 138.3 91 73.6
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 3.1e-31 138.3 95 71.6
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 4.1e-31 137.9 87 72.4
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 5.3e-31 137.5 82 81.7
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 7.0e-31 137.1 91 70.3
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 2.0e-30 135.6 82 80.5
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 3.5e-30 134.8 159 50.9
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 4.5e-30 134.4 94 64.9
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 5.9e-30 134.0 94 66.0
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.3e-29 132.9 92 68.5
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.3e-29 132.9 94 66.0
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 1.7e-29 132.5 82 78.0
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.7e-29 132.5 92 68.5
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.7e-29 132.5 92 68.5
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.7e-29 132.5 92 68.5
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 3.8e-29 131.3 151 51.0
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.9e-28 129.0 78 83.3
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.2e-28 127.1 95 66.3
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 1.4e-26 122.9 91 67.0
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 4.0e-26 121.3 87 65.5
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 5.2e-26 120.9 93 62.4
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 6.7e-26 120.6 69 82.6
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 8.8e-26 120.2 94 58.5
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 2.6e-25 118.6 70 81.4
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 3.3e-25 118.2 63 88.9
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 7.5e-25 117.1 62 87.1
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 9.7e-25 116.7 88 65.9
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 1.3e-24 116.3 62 88.7
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.2e-24 115.5 95 65.3
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 3.7e-24 114.8 63 84.1
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 3.7e-24 114.8 94 53.2
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 1.4e-23 112.8 86 57.0
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 2.4e-23 112.1 95 56.8
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.7e-21 105.9 95 63.2
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 2.2e-21 105.5 85 64.7
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 6.5e-21 104.0 94 55.3
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 6.5e-21 104.0 94 55.3
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.9e-20 102.4 67 74.6
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 1.7e-16 89.4 76 51.3
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 1.6e-14 82.8 87 46.0
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 5.0e-13 77.8 94 42.6
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 6.5e-13 77.4 78 47.4


User provided reference genes

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