Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.8e-107 392.5 185 100.0
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.4e-80 303.1 168 82.7
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 7.1e-72 274.2 168 76.8
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.3e-70 270.0 167 74.3
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-70 270.0 167 74.3
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.7e-70 267.7 167 73.7
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.5e-69 266.5 165 73.3
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 3.3e-61 238.8 165 63.0
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 9.6e-61 237.3 167 61.7
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 6.9e-59 231.1 167 63.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 5.8e-58 228.0 172 60.5
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 6.5e-57 224.6 166 62.0
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.1e-56 223.8 169 62.7
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.4e-56 223.4 157 61.1
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 3.2e-56 222.2 176 57.4
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.2e-56 221.9 168 57.7
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.2e-55 220.3 161 64.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.6e-55 219.9 169 57.4
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 2.1e-55 219.5 176 60.8
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.1e-55 219.5 164 64.0
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.1e-55 219.5 160 64.4
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 6.0e-55 218.0 164 64.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 6.0e-55 218.0 173 58.4
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 7.9e-55 217.6 170 62.4
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.3e-54 216.9 169 59.8
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-54 216.5 162 63.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.8e-54 216.5 150 60.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 2.3e-54 216.1 164 56.7
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 3.0e-54 215.7 167 58.1
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 3.0e-54 215.7 172 58.1
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 3.0e-54 215.7 157 59.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.9e-54 215.3 149 61.7
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 5.1e-54 214.9 149 61.7
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 5.1e-54 214.9 130 70.8
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 8.7e-54 214.2 177 59.3
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 8.7e-54 214.2 174 57.5
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.1e-53 213.8 161 62.1
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-53 213.8 169 58.0
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.5e-53 213.4 170 57.1
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.5e-53 213.4 154 62.3
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.9e-53 213.0 162 61.7
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 2.5e-53 212.6 179 54.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 2.5e-53 212.6 163 63.2
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.5e-53 212.6 170 55.3
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 3.3e-53 212.2 151 61.6
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 3.3e-53 212.2 168 57.7
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 4.3e-53 211.8 177 51.4
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 9.6e-53 210.7 151 61.6
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 9.6e-53 210.7 177 58.2
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.3e-52 210.3 165 63.6
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.1e-52 209.5 165 60.6
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 2.8e-52 209.1 161 61.5
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 4.8e-52 208.4 176 54.5
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 6.3e-52 208.0 163 63.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 8.2e-52 207.6 149 63.1
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.1e-51 207.2 157 58.6
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.4e-51 206.8 158 58.2
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.4e-51 206.8 150 61.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.8e-51 206.5 131 66.4
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.8e-51 206.5 185 53.5
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 4.1e-51 205.3 172 53.5
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 9.0e-51 204.1 164 56.1
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.5e-50 203.4 126 67.5
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 2.0e-50 203.0 126 68.3
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 5.9e-50 201.4 163 56.4
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 7.6e-50 201.1 156 55.8
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 7.6e-50 201.1 153 56.2
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 7.6e-50 201.1 159 56.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.0e-49 200.7 156 62.2
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 2.9e-49 199.1 143 58.0
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 3.2e-48 195.7 179 50.8
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 5.5e-48 194.9 119 64.7
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.7e-47 192.6 128 60.9
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 3.0e-46 189.1 167 51.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.9e-46 188.7 163 55.2
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 6.7e-46 188.0 168 50.6
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.5e-45 186.8 133 65.4
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.3e-44 183.7 122 59.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 6.9e-43 177.9 116 64.7
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 9.1e-43 177.6 146 54.8
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 7.7e-42 174.5 143 59.4
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.2e-41 172.9 118 61.0
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 5.0e-41 171.8 113 59.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 4.2e-40 168.7 143 58.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 6.1e-39 164.9 124 54.8
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 3.0e-38 162.5 143 49.7
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 1.1e-37 160.6 156 55.1
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.5e-37 160.2 192 45.3
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.6e-37 159.5 128 53.1
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 5.7e-37 158.3 156 55.1
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.8e-35 153.3 164 43.9
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 3.1e-35 152.5 165 50.3
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.6e-34 149.4 170 48.8
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 7.2e-32 141.4 87 67.8
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.8e-30 136.7 140 47.1
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.6e-26 122.9 106 50.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.6e-18 97.1 84 52.4
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.0e-17 92.0 64 64.1
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.5e-16 90.5 83 55.4
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.0e-13 80.1 47 68.1
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.6e-13 79.7 88 44.3


User provided reference genes

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