Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 3.1e-126 455.3 255 100.0
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 4.4e-88 328.6 255 66.3
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.4e-70 269.6 256 55.1
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 6.8e-65 251.5 256 50.8
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 8.9e-65 251.1 256 53.9
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 3.2e-62 242.7 254 49.2
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 4.1e-62 242.3 255 49.8
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.0e-61 240.0 253 47.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 2.0e-61 240.0 257 51.8
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 4.6e-61 238.8 253 49.8
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 6.0e-61 238.4 177 60.5
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 1.5e-59 233.8 252 49.2
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.9e-59 233.4 253 47.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.9e-59 233.4 253 47.4
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 4.3e-59 232.3 253 48.2
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 7.3e-59 231.5 257 48.6
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 7.3e-59 231.5 259 49.0
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.2e-58 230.7 255 47.1
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.6e-58 230.3 256 47.7
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 8.1e-58 228.0 256 47.7
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.4e-57 227.3 259 48.3
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.3e-57 226.5 253 45.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.3e-57 226.5 258 46.1
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 6.8e-57 224.9 226 50.9
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 8.9e-57 224.6 222 48.6
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.2e-56 224.2 177 57.6
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 7.5e-56 221.5 223 48.9
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.3e-55 220.7 258 46.9
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.3e-55 220.7 252 46.0
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.7e-55 220.3 259 46.7
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 2.9e-55 219.5 256 47.3
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.7e-55 219.2 259 47.1
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 3.7e-55 219.2 257 49.0
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 4.1e-54 215.7 177 53.1
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 4.1e-54 215.7 177 58.2
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.2e-53 214.2 255 43.9
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.6e-53 213.8 177 57.6
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 7.8e-53 211.5 253 44.3
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.0e-52 211.1 256 42.2
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.7e-52 210.3 245 43.3
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 2.3e-52 209.9 255 43.9
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 3.3e-51 206.1 247 45.3
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.3e-51 205.7 178 53.4
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 7.3e-51 204.9 224 49.1
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 9.5e-51 204.5 254 42.9
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.2e-50 204.1 166 56.0
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.6e-50 203.8 177 52.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 6.2e-50 201.8 177 49.2
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 8.1e-50 201.4 255 43.9
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.8e-49 200.3 256 41.0
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 2.3e-49 199.9 243 46.9
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.0e-48 196.8 177 53.7
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 2.6e-48 196.4 256 39.8
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 4.4e-48 195.7 256 39.8
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 7.6e-48 194.9 178 51.7
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 9.9e-48 194.5 258 40.7
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 1.7e-47 193.7 165 55.8
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.7e-47 192.6 177 49.7
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.3e-47 191.4 177 52.5
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.1e-46 191.0 224 42.9
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.4e-46 190.7 256 39.5
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.2e-46 189.5 257 41.2
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 5.4e-46 188.7 257 41.2
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.1e-46 188.3 257 41.2
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.6e-45 187.2 172 50.6
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.6e-45 185.7 178 50.6
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 6.0e-45 185.3 256 41.0
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 6.0e-45 185.3 168 51.2
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.0e-44 184.5 258 40.3
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.3e-44 184.1 168 50.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.3e-44 184.1 168 50.0
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.3e-44 184.1 170 51.2
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.3e-44 183.3 168 50.6
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 3.9e-44 182.6 178 46.1
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 2.5e-43 179.9 174 49.4
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.6e-43 178.7 270 35.9
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 9.6e-43 177.9 174 49.4
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.2e-42 177.6 174 48.3
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 2.1e-42 176.8 159 50.9
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 3.4e-40 169.5 254 37.4
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.4e-40 169.5 175 46.3
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 5.8e-40 168.7 175 45.7
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.9e-38 163.7 172 43.0
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.4e-38 162.2 279 34.8
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 9.3e-38 161.4 184 42.4
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 4.6e-37 159.1 193 41.5
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 7.8e-37 158.3 184 43.5
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 2.3e-36 156.8 257 33.9
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.1e-34 150.2 257 37.4
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.2e-32 144.4 169 41.4
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 2.4e-30 136.7 177 44.1
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.2e-30 136.0 144 45.8
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.3e-23 114.4 249 31.7
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 1.3e-23 114.4 79 58.2
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 2.4e-22 110.2 122 41.8
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 7.1e-22 108.6 85 57.6
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.0e-20 104.8 90 51.1
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.7e-20 102.1 87 44.8
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 9.6e-19 98.2 73 56.2
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.3e-18 97.8 100 41.0
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.6e-13 80.9 88 47.7
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.0e-13 79.0 78 53.8
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 3.0e-12 76.6 61 60.7
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 1.5e-11 74.3 197 28.4
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 2.5e-11 73.6 195 29.2


User provided reference genes

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