Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 2.3e-93 345.9 221 100.0
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 1.7e-51 206.8 215 67.4
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 6.1e-46 188.3 221 62.4
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.5e-36 157.1 186 67.2
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 4.4e-36 155.6 217 61.8
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.1e-31 141.0 221 48.9
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 3.1e-29 132.9 118 80.5
FAN14G0122 Fragaria x ananassa HOM05D007476 ORTHO05D006998 4.0e-29 132.5 207 58.0
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 3.4e-28 129.4 205 56.1
Haze_20680 Corylus avellana HOM05D007476 ORTHO05D006998 1.3e-27 127.5 297 44.1
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 1.3e-24 117.5 206 53.9
FvH4_6g14930 Fragaria vesca HOM05D007476 ORTHO05D006998 2.3e-24 116.7 185 59.5
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.5e-23 114.0 222 50.0
FAN09G1326 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.9e-23 113.6 185 58.9
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.6e-22 110.5 257 49.0
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 1.8e-21 107.1 137 65.7
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 1.5e-20 104.0 221 52.5
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 3.4e-20 102.8 222 47.7
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 9.8e-20 101.3 162 52.5
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.7e-19 100.5 243 50.6
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.7e-19 99.4 223 47.1
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 6.4e-19 98.6 261 43.7
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.1e-18 97.8 223 46.6
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 2.4e-18 96.7 264 40.9
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 7.8e-17 91.7 220 50.0
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 1.3e-16 90.9 223 48.9
Potri.016G082900 Populus trichocarpa HOM05D007476 ORTHO05D006998 1.3e-16 90.9 229 44.5
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 1.7e-16 90.5 221 50.2
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 2.3e-16 90.1 190 49.5
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 3.9e-16 89.4 219 47.0
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 6.6e-16 88.6 123 69.1
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 3.3e-15 86.3 165 53.9
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 4.3e-15 85.9 236 36.4
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.8e-14 83.2 175 49.1
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 8.1e-14 81.6 203 48.3
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.1e-13 79.7 222 42.8
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 4.0e-13 79.3 204 48.5
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 5.2e-13 79.0 180 50.0
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 5.2e-13 79.0 195 46.7
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 6.8e-13 78.6 180 46.1
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 8.9e-13 78.2 218 46.3
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 3.4e-12 76.3 181 52.5
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 5.8e-12 75.5 151 42.4
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 5.8e-12 75.5 207 49.8
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 4.9e-11 72.4 221 46.2
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 6.4e-11 72.0 207 49.3
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 1.1e-10 71.2 162 46.9
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 2.4e-10 70.1 153 51.6
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 1.2e-09 67.8 222 45.5
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 1.6e-09 67.4 206 48.1
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 2.1e-09 67.0 223 46.2
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 3.5e-09 66.2 115 47.0
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 4.6e-09 65.9 115 43.5
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 4.6e-09 65.9 209 45.5
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 4.6e-09 65.9 149 46.3
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 6.0e-09 65.5 117 47.0
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 1.0e-08 64.7 208 46.6
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 1.0e-08 64.7 161 48.4
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 1.7e-08 63.9 57 59.6
TWI53G1272 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 3.9e-08 62.8 117 46.2
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 5.1e-08 62.4 153 42.5
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 6.6e-08 62.0 114 47.4
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 6.6e-08 62.0 117 46.2
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 8.6e-08 61.6 175 45.7
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 1.1e-07 61.2 209 46.9
Sc01g0003710 Simmondsia chinensis HOM05D007476 ORTHO05D006998 1.9e-07 60.5 232 44.4
TWI74G1466 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 2.5e-07 60.1 211 46.4
BcaC06g34403 Brassica carinata HOM05D001366 ORTHO05D003220 3.3e-07 59.7 43 72.1
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 3.3e-07 59.7 172 43.0
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 4.3e-07 59.3 210 44.8
Sabra06G0105300 Salix brachista HOM05D007476 ORTHO05D006998 4.3e-07 59.3 119 47.1
AUR62040509 Chenopodium quinoa HOM05D007476 ORTHO05D006998 5.6e-07 58.9 230 40.4
COL.COLO4_03678 Corchorus olitorius HOM05D001978 ORTHO05D003036 5.6e-07 58.9 147 38.8
Cpa.g.sc114.33 Carica papaya HOM05D007476 ORTHO05D006998 7.3e-07 58.5 171 45.6
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 7.3e-07 58.5 75 53.3
BraA02t04729Z Brassica rapa HOM05D010138 ORTHO05D006998 9.6e-07 58.2 75 49.3
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 1.2e-06 57.8 219 44.3
Aa31LG1G22120 Aethionema arabicum HOM05D010138 ORTHO05D006998 1.6e-06 57.4 209 43.1
BcaNung03275 Brassica carinata HOM05D010138 ORTHO05D006998 1.6e-06 57.4 162 46.9
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 2.1e-06 57.0 213 38.5
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 2.8e-06 56.6 78 47.4
Actinidia19729 Actinidia chinensis HOM05D007476 ORTHO05D006998 4.7e-06 55.8 75 62.7
MELO3C003078.2 Cucumis melo HOM05D023083 ORTHO05D006998 4.7e-06 55.8 210 41.4
Hma1.2p1_0111F.1_g053570 Hydrangea macrophylla HOM05D007476 ORTHO05D006998 6.2e-06 55.5 221 43.9


User provided reference genes

Program Settings