Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 2.9e-71 271.9 153 100.0
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 7.2e-54 214.2 154 75.3
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 3.4e-51 205.3 154 77.9
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 8.3e-50 200.7 157 72.6
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.1e-49 200.3 151 70.9
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 9.1e-49 197.2 151 70.2
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.9e-48 194.5 151 69.5
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.3e-47 193.4 154 70.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 5.5e-46 188.0 160 65.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 2.1e-45 186.0 155 65.2
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 6.1e-45 184.5 158 63.9
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.0e-44 183.7 155 65.2
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 6.8e-44 181.0 150 66.7
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.8e-44 180.6 151 68.2
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 8.8e-44 180.6 153 63.4
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-43 178.7 151 66.9
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.4e-43 178.3 158 64.6
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.4e-43 178.3 158 64.6
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 9.8e-43 177.2 121 74.4
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 6.3e-42 174.5 113 76.1
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.4e-41 173.3 115 78.3
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.0e-41 171.0 158 61.4
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.0e-40 169.5 125 69.6
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 7.7e-40 167.5 180 55.6
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 7.3e-38 161.0 121 70.2
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.2e-37 160.2 120 70.0
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.6e-37 159.8 122 68.9
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.6e-37 159.8 157 56.1
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 4.7e-37 158.3 120 71.7
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 6.1e-37 157.9 97 80.4
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 6.1e-37 157.9 118 66.9
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 6.1e-37 157.9 120 71.7
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 8.0e-37 157.5 154 60.4
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.4e-36 156.8 121 66.9
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.4e-36 156.8 125 66.4
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.0e-35 152.9 153 58.2
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.0e-35 152.9 114 68.4
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 3.4e-35 152.1 120 66.7
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 7.5e-35 151.0 122 66.4
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 9.8e-35 150.6 136 61.8
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 9.8e-35 150.6 117 65.8
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 2.2e-34 149.4 163 58.9
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.2e-34 149.4 120 68.3
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.7e-34 148.7 164 55.5
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 6.4e-34 147.9 122 65.6
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 8.3e-34 147.5 92 79.3
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 8.3e-34 147.5 113 65.5
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.4e-33 146.0 119 67.2
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 2.4e-33 146.0 117 65.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 3.2e-33 145.6 95 74.7
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 3.2e-33 145.6 95 78.9
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 4.1e-33 145.2 122 64.8
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 5.4e-33 144.8 156 56.4
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 7.0e-33 144.4 111 65.8
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 9.2e-33 144.1 117 65.8
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.7e-32 142.5 109 67.9
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.5e-32 142.1 120 65.0
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 3.5e-32 142.1 97 74.2
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 5.9e-32 141.4 111 66.7
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 5.9e-32 141.4 111 66.7
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 5.9e-32 141.4 107 67.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 5.9e-32 141.4 93 76.3
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 7.8e-32 141.0 118 61.9
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.0e-31 140.6 111 67.6
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.9e-31 138.7 111 65.8
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 5.0e-31 138.3 116 64.7
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 6.6e-31 137.9 111 64.0
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.1e-30 137.1 93 71.0
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.1e-30 137.1 118 61.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.5e-30 136.7 96 72.9
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.9e-30 136.3 115 63.5
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 2.5e-30 136.0 112 65.2
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 2.5e-30 136.0 112 65.2
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 5.6e-30 134.8 113 60.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 9.5e-30 134.0 111 63.1
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.2e-29 133.7 115 62.6
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.7e-29 131.7 93 73.1
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.0e-28 130.6 112 61.6
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.3e-28 129.4 110 61.8
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 4.0e-28 128.6 92 68.5
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 5.2e-28 128.3 115 60.0
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.5e-27 126.7 112 59.8
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 2.0e-27 126.3 116 56.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 3.7e-26 122.1 105 61.0
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 3.7e-26 122.1 105 61.0
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 4.9e-26 121.7 115 59.1
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 6.4e-26 121.3 71 83.1
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.4e-25 120.2 95 66.3
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.9e-25 119.8 115 58.3
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.2e-24 117.1 108 60.2
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 6.0e-24 114.8 79 72.2
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 7.8e-24 114.4 74 73.0
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.1e-22 110.5 76 71.1
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.2e-20 101.7 106 50.0
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 6.8e-20 101.3 93 61.3
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 9.8e-19 97.4 118 50.0
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.6e-16 88.6 76 61.8
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.9e-10 69.3 109 39.4
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.9e-09 66.6 51 64.7
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 3.2e-09 65.9 105 40.0
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 4.1e-09 65.5 85 45.9
Dinv35698 Davidia involucrata HOM05D007368 ORTHO05D009330 5.6e-06 55.1 30 86.7


User provided reference genes

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