Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.4e-54 216.1 109 100.0
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 5.0e-49 197.6 109 90.8
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.9e-48 195.7 109 89.0
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 1.8e-46 189.1 109 85.3
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 6.7e-46 187.2 107 84.1
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 1.1e-45 186.4 109 82.6
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.1e-45 186.4 109 81.7
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.1e-45 186.4 109 82.6
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.3e-45 184.9 109 81.7
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 3.3e-45 184.9 107 81.3
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 4.4e-45 184.5 107 82.2
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.7e-45 184.1 109 80.7
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 9.7e-45 183.3 107 81.3
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 2.8e-44 181.8 107 79.4
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 3.7e-44 181.4 107 79.4
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 3.7e-44 181.4 107 81.3
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 4.8e-44 181.0 107 80.4
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 8.2e-44 180.3 105 84.8
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 1.1e-43 179.9 105 83.8
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 1.1e-43 179.9 107 80.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 2.4e-43 178.7 105 82.9
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 2.4e-43 178.7 104 81.7
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 3.1e-43 178.3 107 78.5
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 3.1e-43 178.3 107 80.4
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 4.1e-43 177.9 105 82.9
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 1.2e-42 176.4 105 81.0
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.2e-42 176.4 109 76.1
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 2.6e-42 175.3 105 77.1
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 2.6e-42 175.3 105 79.0
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 7.7e-42 173.7 105 79.0
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.3e-41 172.9 102 80.4
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 1.7e-41 172.6 107 75.7
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 2.9e-41 171.8 105 75.2
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 3.8e-41 171.4 107 78.5
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 5.0e-41 171.0 107 77.6
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 5.0e-41 171.0 107 77.6
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 8.5e-41 170.2 104 79.8
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 8.5e-41 170.2 105 76.2
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 1.1e-40 169.9 105 74.3
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.1e-40 169.9 107 77.6
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 1.5e-40 169.5 105 76.2
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 1.5e-40 169.5 105 76.2
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.5e-40 169.5 105 73.3
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.9e-40 169.1 105 74.3
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.5e-40 168.7 102 76.5
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.2e-40 168.3 105 74.3
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 3.2e-40 168.3 107 74.8
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 4.2e-40 167.9 105 71.4
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 5.5e-40 167.5 102 76.5
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 7.2e-40 167.2 107 73.8
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 7.2e-40 167.2 107 72.0
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 7.2e-40 167.2 107 75.7
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 9.4e-40 166.8 107 74.8
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 1.2e-39 166.4 102 75.5
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.2e-39 166.4 107 73.8
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 1.6e-39 166.0 107 74.8
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 74.3
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 2.1e-39 165.6 105 75.2
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 2.1e-39 165.6 107 73.8
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 2.7e-39 165.2 101 75.2
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 75.2
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 3.6e-39 164.9 107 75.7
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 3.6e-39 164.9 105 73.3
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 4.7e-39 164.5 102 74.5
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 4.7e-39 164.5 105 70.5
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 6.1e-39 164.1 105 73.3
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 6.1e-39 164.1 105 69.5
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 6.1e-39 164.1 105 69.5
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 8.0e-39 163.7 105 70.5
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 8.0e-39 163.7 104 72.1
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.0e-39 163.7 105 73.3
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 8.0e-39 163.7 107 72.0
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 8.0e-39 163.7 105 76.2
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 1.0e-38 163.3 102 73.5
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.0e-38 163.3 103 74.8
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 1.0e-38 163.3 107 72.9
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.4e-38 162.9 105 72.4
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 1.4e-38 162.9 107 71.0
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.4e-38 162.9 107 75.7
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.8e-38 162.5 102 75.5
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.3e-38 162.2 102 74.5
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 3.0e-38 161.8 102 72.5
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 4.0e-38 161.4 107 72.9
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 6.7e-38 160.6 102 73.5
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.2e-37 159.8 109 69.7
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 1.2e-37 159.8 101 74.3
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 7.5e-37 157.1 107 68.2
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.3e-36 156.4 107 71.0
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.3e-36 156.4 105 72.4
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 1.7e-36 156.0 107 72.0
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 6.3e-36 154.1 105 68.6
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.4e-35 152.9 104 69.2
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 4.1e-35 151.4 105 66.7
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.3e-35 151.0 103 65.0
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.3e-35 151.0 103 65.0
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 4.5e-34 147.9 105 67.6
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 2.2e-33 145.6 93 74.2
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 3.8e-33 144.8 136 57.4
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 1.1e-32 143.3 99 65.7
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.9e-32 142.5 109 67.0
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.9e-32 142.5 105 65.7
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 1.9e-32 142.5 133 52.6
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 3.2e-32 141.7 105 64.8
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 4.7e-31 137.9 106 63.2
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 4.0e-30 134.8 91 69.2
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 8.8e-30 133.7 106 58.5
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 2.0e-29 132.5 107 57.9
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.3e-28 129.8 106 59.4
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.2e-28 129.0 115 60.0
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 3.1e-27 125.2 104 54.8
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 5.4e-27 124.4 98 57.1
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 2.0e-26 122.5 77 75.3
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 4.5e-26 121.3 92 59.8
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 7.7e-26 120.6 91 64.8
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 7.7e-26 120.6 78 73.1
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 3.8e-25 118.2 78 69.2
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 9.5e-24 113.6 70 80.0
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 9.5e-24 113.6 70 80.0
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 9.5e-24 113.6 76 69.7
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.8e-23 112.1 83 60.2
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 2.8e-23 112.1 91 57.1
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 6.1e-23 110.9 86 65.1
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 8.0e-23 110.5 96 53.1
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 1.5e-21 106.3 106 55.7
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 7.5e-21 104.0 113 54.0
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 2.8e-20 102.1 68 69.1
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.7e-20 101.7 105 53.3
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 5.4e-19 97.8 76 61.8
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 2.8e-15 85.5 50 82.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 5.8e-13 77.8 82 54.9
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 7.5e-13 77.4 46 76.1
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 3.9e-09 65.1 42 66.7
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 6.6e-09 64.3 45 66.7
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 6.6e-09 64.3 86 37.2


User provided reference genes

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