Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 4.4e-78 294.7 162 100.0
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 2.9e-53 212.2 163 76.1
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 1.4e-34 150.2 165 63.0
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 3.8e-29 132.1 171 51.5
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 1.2e-27 127.1 167 56.9
FAN23G3114 Fragaria x ananassa HOM05D007502 ORTHO05D010230 1.0e-26 124.0 131 61.1
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 2.0e-25 119.8 162 50.6
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 1.7e-24 116.7 164 50.6
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 3.7e-24 115.5 175 50.3
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 2.4e-23 112.8 165 50.3
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 1.2e-22 110.5 174 46.6
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 1.6e-22 110.2 164 52.4
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 4.5e-22 108.6 169 50.3
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 2.2e-21 106.3 170 47.6
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 3.8e-21 105.5 165 50.9
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 1.5e-20 103.6 171 43.3
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 1.9e-20 103.2 176 44.9
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 2.5e-20 102.8 154 50.0
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 1.6e-19 100.1 169 48.5
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 2.1e-19 99.8 159 49.1
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 3.6e-19 99.0 147 46.3
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 3.6e-19 99.0 167 46.1
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 3.6e-19 99.0 161 43.5
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 1.4e-18 97.1 179 43.6
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 4.0e-18 95.5 130 52.3
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 1.2e-17 94.0 162 42.6
FvH4_1g17950 Fragaria vesca HOM05D007502 ORTHO05D010230 1.5e-17 93.6 163 46.0
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 7.5e-17 91.3 161 42.2
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 1.3e-16 90.5 178 44.4
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 2.2e-16 89.7 168 42.3
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 2.2e-16 89.7 168 42.3
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 2.2e-16 89.7 164 43.3
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 2.8e-16 89.4 168 41.7
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 2.8e-16 89.4 142 49.3
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 2.8e-16 89.4 163 39.3
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 1.1e-15 87.4 170 44.1
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 1.1e-15 87.4 164 43.9
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.8e-15 86.7 165 41.8
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 3.1e-15 85.9 164 47.0
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 7.0e-15 84.7 125 48.0
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 7.0e-15 84.7 175 42.3
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 9.1e-15 84.3 174 37.4
FAN19G2042 Fragaria x ananassa HOM05D000058 ORTHO05D000255 2.0e-14 83.2 157 43.9
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 2.7e-14 82.8 126 42.9
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 2.7e-14 82.8 170 41.8
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 4.5e-14 82.0 129 42.6
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 5.9e-14 81.6 167 44.3
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 2.2e-13 79.7 191 39.3
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 2.9e-13 79.3 178 38.8
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 2.5e-12 76.3 198 39.9
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 2.5e-12 76.3 162 42.6
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 7.2e-12 74.7 181 35.9
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 2.1e-11 73.2 166 42.2
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 2.1e-11 73.2 130 40.8
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 2.7e-11 72.8 192 38.5
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 4.7e-11 72.0 109 45.0
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 4.7e-11 72.0 119 41.2
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 1.0e-10 70.9 176 36.9
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 2.6e-09 66.2 193 33.2
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 5.7e-09 65.1 115 38.3
Actinidia36426 Actinidia chinensis HOM05D001896 ORTHO05D001862 4.9e-08 62.0 79 53.2
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 8.3e-08 61.2 105 43.8
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 8.3e-08 61.2 169 34.9
Dinv23033 Davidia involucrata HOM05D001896 ORTHO05D001862 1.1e-07 60.8 115 46.1
Lsat_1_v5_gn_4_132041 Lactuca sativa HOM05D007502 ORTHO05D010230 4.1e-07 58.9 89 46.1
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 4.1e-07 58.9 169 36.7
Haze_15266 Corylus avellana HOM05D064528 ORTHO05D043735 5.4e-07 58.5 104 46.2
Nitab4.5_0003129g0050 Nicotiana tabacum HOM05D007502 ORTHO05D010230 5.4e-07 58.5 78 48.7
HanXRQChr01g0002171 Helianthus annuus HOM05D007502 ORTHO05D010230 7.0e-07 58.2 142 33.1
ATR0739G061 Amborella trichopoda HOM05D007502 ORTHO05D010230 1.2e-06 57.4 94 44.7
AL8G43660 Arabidopsis lyrata HOM05D007502 ORTHO05D010230 3.5e-06 55.8 139 36.7
Cfa004146 Carpinus fangiana HOM05D064528 ORTHO05D043735 4.5e-06 55.5 96 47.9


User provided reference genes

Program Settings