Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 1.8e-46 188.7 83 100.0
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 1.8e-46 188.7 83 100.0
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 1.5e-42 175.6 83 92.8
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 1.0e-41 172.9 83 91.6
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 6.7e-30 133.7 59 91.5
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.8e-19 99.0 84 54.8
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 4.1e-19 97.8 85 54.1
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.5e-18 94.7 56 66.1
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 4.5e-18 94.4 86 51.2
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 4.5e-18 94.4 56 67.9
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 4.5e-18 94.4 56 67.9
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.9e-18 94.0 56 66.1
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.9e-18 94.0 56 67.9
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.7e-17 92.4 83 53.0
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 2.2e-17 92.0 55 65.5
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 2.2e-17 92.0 83 54.2
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 2.9e-17 91.7 54 64.8
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.0e-17 90.9 56 64.3
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 8.5e-17 90.1 56 64.3
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 8.5e-17 90.1 56 64.3
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 1.1e-16 89.7 85 50.6
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.1e-16 89.7 83 51.8
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 2.5e-16 88.6 77 54.5
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 2.5e-16 88.6 86 44.2
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 3.2e-16 88.2 54 63.0
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 3.2e-16 88.2 57 61.4
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 4.2e-16 87.8 81 53.1
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 5.5e-16 87.4 57 59.6
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 5.5e-16 87.4 86 48.8
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 5.5e-16 87.4 56 62.5
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 7.2e-16 87.0 85 49.4
Potri.005G074350 Populus trichocarpa HOM05D008282 ORTHO05D009173 7.2e-16 87.0 85 51.8
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 4.7e-15 84.3 56 57.1
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 1.8e-14 82.4 83 49.4
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 3.0e-14 81.6 83 41.0
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 4.0e-14 81.3 79 54.4
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 5.2e-14 80.9 54 57.4
MELO3C029307.2 Cucumis melo HOM05D008282 ORTHO05D009173 6.8e-14 80.5 54 61.1
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 8.8e-14 80.1 53 64.2
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 1.2e-13 79.7 50 64.0
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 2.0e-13 79.0 57 57.9
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 3.4e-13 78.2 75 42.7
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 1.3e-12 76.3 75 48.0
FvH4_4g06730 Fragaria vesca HOM05D008282 ORTHO05D009173 1.3e-12 76.3 76 48.7
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.3e-12 76.3 75 41.3
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.7e-12 75.9 56 58.9
Sopen07g004270 Solanum pennellii HOM05D008282 ORTHO05D009173 1.1e-11 73.2 56 50.0
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.4e-11 72.8 58 55.2
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 4.1e-11 71.2 75 46.7
Solyc07g008373.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.2e-10 69.7 56 48.2
ClCG03G016530 Citrullus lanatus HOM05D008282 ORTHO05D009173 2.7e-10 68.6 45 60.0
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 3.5e-10 68.2 45 57.8
Atru.chr11.1626 Acer truncatum HOM05D008282 ORTHO05D009173 1.3e-09 66.2 68 44.1
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 2.2e-09 65.5 85 41.2
Thecc.05G205200 Theobroma cacao HOM05D008282 ORTHO05D000004 2.2e-09 65.5 56 48.2
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 2.9e-09 65.1 77 44.2
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 2.9e-09 65.1 77 44.2
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 3.2e-08 61.6 85 40.0
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 3.2e-08 61.6 85 40.0
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 5.5e-08 60.8 83 43.4
Gohir.A02G058204 Gossypium hirsutum HOM05D008282 ORTHO05D009173 5.5e-08 60.8 55 49.1
Psat7g096320 Pisum sativum HOM05D009110 ORTHO05D011182 2.7e-07 58.5 84 36.9
PSO063G3641 Papaver somniferum HOM05D008282 ORTHO05D009173 6.8e-06 53.9 78 34.6


User provided reference genes

Program Settings