Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 5.4e-42 174.1 99 100.0
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 4.0e-29 131.3 94 75.5
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 3.4e-28 128.3 93 75.3
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 9.8e-28 126.7 95 72.6
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.7e-27 125.9 99 71.7
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.9e-27 125.2 94 74.5
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.9e-27 124.4 94 73.4
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.9e-27 124.4 94 73.4
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-27 124.0 94 74.5
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 5.0e-24 114.4 96 66.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 8.6e-24 113.6 94 64.9
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.5e-23 112.8 94 64.9
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.5e-23 112.1 91 65.9
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.6e-23 110.9 91 65.9
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 2.1e-22 109.0 91 67.0
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.8e-22 108.6 95 65.3
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 2.8e-22 108.6 101 61.4
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 2.3e-21 105.5 94 62.8
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 6.8e-21 104.0 94 64.9
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 6.8e-21 104.0 94 64.9
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.4e-20 101.3 94 62.8
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.4e-20 101.3 94 62.8
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 4.4e-20 101.3 94 62.8
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 4.4e-20 101.3 96 62.5
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 9.8e-20 100.1 101 64.4
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.7e-19 99.4 96 62.5
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.7e-19 99.4 100 60.0
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 2.2e-19 99.0 94 59.6
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.9e-18 95.9 92 56.5
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.4e-18 95.5 101 58.4
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 2.4e-18 95.5 87 67.8
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.4e-18 95.5 87 67.8
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 9.2e-18 93.6 93 63.4
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 9.2e-18 93.6 97 53.6
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 9.2e-18 93.6 94 54.3
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.2e-17 93.2 92 55.4
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.2e-17 93.2 92 55.4
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.6e-17 92.8 87 65.5
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 2.7e-17 92.0 98 59.2
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.0e-17 90.9 86 64.0
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 7.8e-17 90.5 99 51.5
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.0e-16 90.1 93 57.0
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.3e-16 89.7 91 54.9
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.3e-16 89.7 92 54.3
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.7e-16 89.4 96 55.2
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 3.0e-16 88.6 92 56.5
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.0e-16 88.6 94 56.4
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.9e-16 88.2 94 56.4
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.9e-15 85.9 96 55.2
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 2.5e-15 85.5 92 53.3
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.5e-15 85.5 88 56.8
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.5e-15 85.5 98 51.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.3e-15 85.1 91 56.0
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 4.3e-15 84.7 91 56.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.3e-15 84.7 92 53.3
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 7.3e-15 84.0 93 52.7
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 9.5e-15 83.6 92 53.3
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 9.5e-15 83.6 91 52.7
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 2.1e-14 82.4 87 55.2
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.1e-14 82.4 84 61.9
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 6.2e-14 80.9 99 59.6
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 8.1e-14 80.5 91 53.8
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 4.0e-13 78.2 96 49.0
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 5.2e-13 77.8 97 50.5
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.8e-13 77.4 92 50.0
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.2e-12 76.6 92 54.3
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 1.5e-12 76.3 95 52.6
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 3.4e-12 75.1 96 49.0
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 1.7e-11 72.8 95 46.3
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.2e-11 72.4 91 45.1
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 4.9e-11 71.2 63 68.3
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.9e-10 69.3 66 59.1
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 4.1e-10 68.2 70 58.6
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 9.2e-10 67.0 82 51.2
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 2.7e-09 65.5 87 58.6
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 4.6e-09 64.7 87 57.5
TAR376G0716 Trochodendron aralioides HOM05D007889 ORTHO05D009987 3.3e-07 58.5 94 46.8
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 5.6e-07 57.8 50 64.0


User provided reference genes

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