Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G200500 Prunus persica HOM05D001749 ORTHO05D001632 2.0e-98 362.5 191 100.0
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 3.6e-26 122.5 73 86.3
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 3.8e-20 102.4 76 72.4
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.8e-20 102.4 76 72.4
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.8e-20 102.4 76 72.4
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 4.2e-19 99.0 76 71.1
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 9.4e-19 97.8 67 70.1
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 2.1e-18 96.7 67 73.1
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.6e-18 95.9 76 68.4
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 2.7e-13 79.7 65 61.5
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 2.7e-13 79.7 65 60.0
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 4.5e-13 79.0 76 56.6
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 7.7e-13 78.2 79 54.4
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 7.7e-13 78.2 75 56.0
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.3e-12 77.4 67 61.2
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 2.2e-12 76.6 76 51.3
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 2.2e-12 76.6 64 60.9
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 2.9e-12 76.3 70 58.6
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 2.9e-12 76.3 75 52.0
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 3.8e-12 75.9 61 57.4
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 5.0e-12 75.5 67 55.2
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 8.5e-12 74.7 65 61.5
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 8.5e-12 74.7 58 62.1
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.1e-11 74.3 58 60.3
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 1.5e-11 73.9 65 58.5
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.9e-11 73.6 65 60.0
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 1.9e-11 73.6 63 58.7
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 2.5e-11 73.2 76 51.3
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 3.2e-11 72.8 67 56.7
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 4.2e-11 72.4 63 57.1
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 4.2e-11 72.4 73 53.4
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 5.5e-11 72.0 58 60.3
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 5.5e-11 72.0 75 50.7
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 7.2e-11 71.6 66 56.1
Gohir.D02G217101 Gossypium hirsutum HOM05D001749 ORTHO05D001632 9.4e-11 71.2 65 60.0
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 9.4e-11 71.2 73 52.1
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 2.1e-10 70.1 72 50.0
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 2.7e-10 69.7 64 56.2
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 3.6e-10 69.3 66 54.5
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 3.6e-10 69.3 65 55.4
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 4.7e-10 68.9 76 48.7
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 6.1e-10 68.6 72 54.2
PGR031G2349 Punica granatum HOM05D001749 ORTHO05D001632 6.1e-10 68.6 62 53.2
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 6.1e-10 68.6 74 51.4
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 8.0e-10 68.2 77 50.6
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 1.4e-09 67.4 76 50.0
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 1.8e-09 67.0 75 48.0
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 1.8e-09 67.0 75 48.0
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.8e-09 67.0 79 46.8
arahy.Tifrunner.gnm1.ann1.HXWY1L Arachis hypogaea HOM05D001749 ORTHO05D001632 3.0e-09 66.2 76 47.4
Dinv23498 Davidia involucrata HOM05D001749 ORTHO05D001632 3.0e-09 66.2 66 51.5
Dinv42048 Davidia involucrata HOM05D001749 ORTHO05D001632 5.2e-09 65.5 66 53.0
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 6.8e-09 65.1 75 46.7
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 8.8e-09 64.7 65 52.3
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 8.8e-09 64.7 70 48.6
CARHR242840 Cardamine hirsuta HOM05D001749 ORTHO05D001632 1.2e-08 64.3 77 50.6
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 1.2e-08 64.3 73 49.3
AT4G34560 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 1.5e-08 63.9 77 46.8
arahy.Tifrunner.gnm1.ann1.39NQDQ Arachis hypogaea HOM05D001749 ORTHO05D001632 2.0e-08 63.5 76 46.1
arahy.Tifrunner.gnm1.ann1.BPXV57 Arachis hypogaea HOM05D001749 ORTHO05D001632 2.0e-08 63.5 76 46.1
Dinv13495 Davidia involucrata HOM05D001749 ORTHO05D001632 2.6e-08 63.2 91 37.4
Carub.0007s0573 Capsella rubella HOM05D001749 ORTHO05D001632 4.4e-08 62.4 77 49.4
Glyma.12G041200 Glycine max HOM05D001749 ORTHO05D001632 4.4e-08 62.4 77 45.5
THA.LOC104819615 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 4.4e-08 62.4 67 50.7
AL7G16650 Arabidopsis lyrata HOM05D001749 ORTHO05D001632 5.7e-08 62.0 77 45.5
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 5.7e-08 62.0 63 49.2
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 5.7e-08 62.0 58 48.3
Nitab4.5_0000308g0310 Nicotiana tabacum HOM05D001749 ORTHO05D001632 5.7e-08 62.0 76 51.3
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 5.7e-08 62.0 77 50.6
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 7.5e-08 61.6 73 47.9
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 9.8e-08 61.2 71 49.3
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.3e-07 60.8 63 49.2
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.3e-07 60.8 63 49.2
Medtr3g117050 Medicago truncatula HOM05D001749 ORTHO05D001632 1.3e-07 60.8 76 52.6
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.7e-07 60.5 73 46.6
CAN.G1058.9 Capsicum annuum HOM05D001749 ORTHO05D001632 2.2e-07 60.1 68 47.1
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 2.2e-07 60.1 62 51.6
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 2.2e-07 60.1 77 45.5
Oeu029154.2 Olea europaea HOM05D001749 ORTHO05D001632 2.2e-07 60.1 70 44.3
Phvul.011G043200 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 2.2e-07 60.1 78 41.0
Lj1g0015330 Lotus japonicus HOM05D001749 ORTHO05D001632 2.8e-07 59.7 63 52.4
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 3.7e-07 59.3 73 39.7
Nitab4.5_0018301g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.7e-07 59.3 70 51.4
PSO675G0347 Papaver somniferum HOM05D001749 ORTHO05D001632 3.7e-07 59.3 65 43.1
SalBow3G2565 Salvia bowleyana HOM05D001749 ORTHO05D001632 3.7e-07 59.3 60 51.7
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 4.8e-07 58.9 70 41.4
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 4.8e-07 58.9 60 50.0
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 4.8e-07 58.9 61 44.3
ECA232G4251 Erigeron canadensis HOM05D001749 ORTHO05D001632 6.3e-07 58.5 65 46.2
Ca_15357_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 8.3e-07 58.2 83 44.6
arahy.Tifrunner.gnm1.ann1.RJ9RH5 Arachis hypogaea HOM05D001749 ORTHO05D001632 1.1e-06 57.8 70 47.1
Migut.B00219 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.1e-06 57.8 65 43.1
PSO541G5621 Papaver somniferum HOM05D001749 ORTHO05D001632 1.1e-06 57.8 65 43.1
Sopen01g052010 Solanum pennellii HOM05D001749 ORTHO05D001632 1.1e-06 57.8 59 50.8
Aqoxy5G01581 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 1.4e-06 57.4 72 45.8
Solyc01g109800.2 Solanum lycopersicum HOM05D001749 ORTHO05D001632 1.4e-06 57.4 59 52.5
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 2.4e-06 56.6 74 39.2
Nitab4.5_0001617g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.1e-06 56.2 77 39.0
Peaxi162Scf00684g00210 Petunia axillaris HOM05D001749 ORTHO05D001632 3.1e-06 56.2 63 49.2
Sp7g32350 Schrenkiella parvula HOM05D001749 ORTHO05D001632 3.1e-06 56.2 77 42.9
PGSC0003DMG400003523 Solanum tuberosum HOM05D001749 ORTHO05D001632 3.1e-06 56.2 64 40.6
VMungo0251G1135 Vigna mungo HOM05D001749 ORTHO05D001632 3.1e-06 56.2 74 43.2
Haze_15059 Corylus avellana HOM05D001749 ORTHO05D001632 4.1e-06 55.8 89 34.8
Thhalv10027578m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 4.1e-06 55.8 77 45.5
Lsat_1_v5_gn_7_90501 Lactuca sativa HOM05D001749 ORTHO05D001632 4.1e-06 55.8 70 44.3
TPR.G32205 Trifolium pratense HOM05D001749 ORTHO05D001632 4.1e-06 55.8 66 53.0
MSTRG.27689 Avicennia marina HOM05D001749 ORTHO05D001632 5.4e-06 55.5 61 41.0
CiPaw.02G020500 Carya illinoinensis HOM05D001749 ORTHO05D001632 5.4e-06 55.5 68 42.6
Nitab4.5_0003001g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 5.4e-06 55.5 64 45.3
PGSC0003DMG400000718 Solanum tuberosum HOM05D001749 ORTHO05D001632 5.4e-06 55.5 75 42.7
Nitab4.5_0011923g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.0e-06 55.1 65 49.2
Solyc03g033860.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 7.0e-06 55.1 64 48.4
Aa31LG2G15960 Aethionema arabicum HOM05D001749 ORTHO05D001632 9.1e-06 54.7 72 41.7
A01p03930 Brassica napus HOM05D001749 ORTHO05D001632 9.1e-06 54.7 68 48.5
BraA01t00380Z Brassica rapa HOM05D001749 ORTHO05D001632 9.1e-06 54.7 68 48.5
Cc02_g17320 Coffea canephora HOM05D001749 ORTHO05D001632 9.1e-06 54.7 65 50.8
Sopen03g006620 Solanum pennellii HOM05D001749 ORTHO05D001632 9.1e-06 54.7 64 48.4


User provided reference genes

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