Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 8.4e-140 500.4 256 100.0
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 4.1e-110 401.7 268 79.9
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 8.2e-103 377.5 259 77.6
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 6.5e-100 367.9 213 86.4
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.9e-99 366.3 219 83.6
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.9e-99 366.3 228 81.6
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.9e-99 366.3 228 81.6
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 3.2e-99 365.5 219 83.1
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 3.2e-99 365.5 244 81.1
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 3.2e-99 365.5 213 82.6
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.2e-99 365.2 213 85.9
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.2e-99 364.4 244 80.7
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 8.0e-98 360.9 254 74.4
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 8.0e-98 360.9 239 74.9
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.3e-97 359.4 237 77.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 3.0e-97 359.0 239 77.0
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.2e-96 357.1 215 82.8
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.5e-96 356.7 211 80.6
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.0e-96 356.3 225 79.6
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.6e-96 355.9 235 76.2
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.4e-96 355.5 240 80.4
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.4e-96 355.1 197 85.8
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.3e-95 353.6 230 78.3
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.7e-95 353.2 206 83.5
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.4e-94 350.1 214 80.8
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.4e-94 350.1 201 85.1
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.8e-94 349.7 214 81.3
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.4e-94 349.4 217 78.3
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.4e-94 349.4 215 80.9
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 2.4e-94 349.4 198 86.9
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 4.1e-94 348.6 230 76.5
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 5.4e-94 348.2 245 73.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 5.4e-94 348.2 201 85.1
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.0e-94 347.8 242 75.2
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 9.1e-94 347.4 199 83.4
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.2e-93 347.1 199 83.4
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.0e-93 346.3 217 81.1
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.0e-93 346.3 201 83.1
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 4.5e-93 345.1 199 84.4
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 4.5e-93 345.1 214 79.9
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.9e-92 342.4 247 74.9
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.9e-92 342.4 200 81.5
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 3.8e-92 342.0 246 69.5
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 5.0e-92 341.7 213 78.9
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.1e-91 340.5 197 82.7
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.5e-91 340.1 237 74.7
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 1.5e-91 340.1 201 81.1
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.9e-91 339.7 209 77.5
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.9e-91 339.7 200 81.5
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.9e-91 339.7 201 80.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 5.5e-91 338.2 215 79.1
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.2e-90 337.0 198 81.3
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.6e-90 336.7 196 82.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.4e-89 333.6 216 77.3
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.8e-89 333.2 227 73.6
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 8.9e-89 330.9 200 80.0
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 8.9e-89 330.9 210 76.2
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.2e-88 330.5 219 75.3
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 1.5e-88 330.1 235 68.9
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.5e-88 330.1 234 70.9
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.5e-88 330.1 214 75.2
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.0e-88 329.7 213 78.4
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.4e-88 328.9 214 74.8
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.4e-88 328.6 232 71.6
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 4.9e-87 325.1 209 76.1
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 6.3e-87 324.7 196 81.1
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 6.3e-87 324.7 230 71.7
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 8.3e-87 324.3 198 79.3
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.1e-86 323.9 233 71.2
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.1e-86 323.9 190 80.5
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.4e-86 323.6 220 74.1
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.1e-86 322.4 214 75.2
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 5.4e-86 321.6 199 77.4
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 5.4e-86 321.6 199 79.4
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 5.4e-86 321.6 199 79.4
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 3.5e-85 318.9 198 79.8
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 5.9e-85 318.2 199 78.4
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.9e-85 318.2 236 74.6
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 7.8e-85 317.8 200 77.0
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 7.8e-85 317.8 199 78.4
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.0e-84 317.4 199 78.4
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.3e-84 317.0 216 74.5
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 2.3e-84 316.2 198 76.3
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.3e-83 312.4 218 72.0
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.6e-82 310.1 183 85.8
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 2.1e-82 309.7 199 75.9
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 8.9e-81 304.3 195 74.9
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.6e-77 293.5 194 70.6
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 6.0e-77 291.6 225 66.2
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.5e-75 287.0 193 71.5
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 2.8e-66 256.1 191 63.4
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.3e-65 253.1 147 83.0
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.2e-61 240.7 131 89.3
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.5e-59 233.8 129 89.1
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.3e-59 231.5 244 54.9
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.6e-56 221.5 244 54.1
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 4.6e-53 212.2 152 71.1
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.9e-51 206.8 159 64.2
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 6.9e-49 198.4 208 47.6
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.4e-47 191.4 250 47.6
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 3.2e-46 189.5 145 60.0
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.5e-43 179.9 131 66.4
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 4.8e-42 175.6 209 44.0
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.8e-41 173.7 140 75.7
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 2.4e-41 173.3 127 74.0
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.9e-38 163.7 97 78.4
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.4e-38 163.3 112 70.5
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 6.9e-33 145.2 130 63.1
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.5e-32 144.1 122 60.7
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.9e-31 139.8 98 67.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 8.4e-31 138.3 136 48.5
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 3.2e-30 136.3 93 75.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 4.2e-30 136.0 201 38.3
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 9.3e-30 134.8 177 41.8
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 7.9e-21 105.1 71 64.8
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.1e-19 101.3 93 60.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 4.8e-18 95.9 53 77.4
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 5.0e-15 85.9 51 80.4
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 5.1e-12 75.9 65 55.4
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 5.1e-12 75.9 60 56.7
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.5e-11 73.6 55 54.5
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.3e-11 73.2 51 60.8
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 4.1e-09 66.2 68 54.4
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 9.1e-09 65.1 43 74.4
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 7.7e-08 62.0 41 73.2


User provided reference genes

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