Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G169100 Prunus persica HOM05D001368 ORTHO05D013268 3.1e-78 295.0 146 100.0
Prupe.3G101300 Prunus persica HOM05D001368 ORTHO05D013268 1.9e-72 275.8 139 97.8
Prupe.5G113500 Prunus persica HOM05D002964 ORTHO05D013268 1.1e-48 196.8 104 95.2
MD06G1099800 Malus domestica HOM05D002964 ORTHO05D013268 1.9e-32 142.9 109 70.6
MD14G1119500 Malus domestica HOM05D002964 ORTHO05D013268 1.2e-29 133.7 105 72.4
RcHm_v2.0_Chr7g0195651 Rosa chinensis HOM05D002964 ORTHO05D013268 8.0e-18 94.4 104 51.9
FAN13G0794 Fragaria x ananassa HOM05D002964 ORTHO05D013268 3.1e-14 82.4 104 50.0
FAN13G1940 Fragaria x ananassa HOM05D002964 ORTHO05D013268 1.6e-13 80.1 104 49.0
FAN08G1918 Fragaria x ananassa HOM05D002964 ORTHO05D013268 5.9e-13 78.2 104 47.1
COL.COLO4_19273 Corchorus olitorius HOM05D001368 ORTHO05D003108 4.7e-10 68.6 53 66.0
Prupe.6G117100 Prunus persica HOM05D001368 ORTHO05D003108 4.7e-10 68.6 53 66.0
Dinv38872 Davidia involucrata HOM05D002964 ORTHO05D003498 6.1e-10 68.2 102 45.1
MD03G1132600 Malus domestica HOM05D001368 ORTHO05D003108 8.0e-10 67.8 53 64.2
Dinv29410 Davidia involucrata HOM05D001368 ORTHO05D003108 1.0e-09 67.4 53 64.2
Hma1.2p1_0051F.1_g029800 Hydrangea macrophylla HOM05D001368 ORTHO05D003108 1.0e-09 67.4 53 64.2
Cpa.g.sc47.45 Carica papaya HOM05D001368 ORTHO05D003108 1.4e-09 67.0 53 64.2
MD11G1154900 Malus domestica HOM05D001368 ORTHO05D003108 1.4e-09 67.0 53 64.2
Cc01_g09950 Coffea canephora HOM05D001368 ORTHO05D003108 2.3e-09 66.2 53 62.3
RcHm_v2.0_Chr5g0055771 Rosa chinensis HOM05D001368 ORTHO05D003108 2.3e-09 66.2 53 64.2
DCAR_011613 Daucus carota HOM05D001368 ORTHO05D003108 3.0e-09 65.9 53 64.2
Lj1C218T7 Lonicera japonica HOM05D001368 ORTHO05D003108 3.0e-09 65.9 53 64.2
QL01p014032 Quercus lobata HOM05D001368 ORTHO05D003108 3.0e-09 65.9 53 66.0
Atru.chr3.3403 Acer truncatum HOM05D001368 ORTHO05D003108 5.2e-09 65.1 53 64.2
CANSAT64G0750 Cannabis sativa HOM05D001368 ORTHO05D003108 5.2e-09 65.1 53 64.2
CiPaw.10G148700 Carya illinoinensis HOM05D001368 ORTHO05D003108 5.2e-09 65.1 53 64.2
Eucgr.B03901 Eucalyptus grandis HOM05D001368 ORTHO05D003108 5.2e-09 65.1 53 64.2
Sabra09G0119100 Salix brachista HOM05D001368 ORTHO05D003108 5.2e-09 65.1 33 87.9
Thecc.09G293400 Theobroma cacao HOM05D001368 ORTHO05D003108 5.2e-09 65.1 53 64.2
Gohir.D09G091800 Gossypium hirsutum HOM05D001368 ORTHO05D003108 6.7e-09 64.7 52 63.5
Gorai.006G108400 Gossypium raimondii HOM05D001368 ORTHO05D003108 6.7e-09 64.7 52 63.5
Actinidia24173 Actinidia chinensis HOM05D001368 ORTHO05D003108 8.8e-09 64.3 53 62.3
MSTRG.18718 Avicennia marina HOM05D001368 ORTHO05D003108 8.8e-09 64.3 53 60.4
Duzib168G0059 Durio zibethinus HOM05D001368 ORTHO05D003108 8.8e-09 64.3 33 84.8
FvH4_3g30080 Fragaria vesca HOM05D001368 ORTHO05D003108 8.8e-09 64.3 53 62.3
FAN11G3135 Fragaria x ananassa HOM05D001368 ORTHO05D003108 8.8e-09 64.3 53 62.3
FAN21G4064 Fragaria x ananassa HOM05D001368 ORTHO05D003108 8.8e-09 64.3 53 62.3
Gohir.A13G223200 Gossypium hirsutum HOM05D001368 ORTHO05D003108 8.8e-09 64.3 33 87.9
Gorai.013G258700 Gossypium raimondii HOM05D001368 ORTHO05D003108 8.8e-09 64.3 33 87.9
Manes.11G155600 Manihot esculenta HOM05D001368 ORTHO05D003108 8.8e-09 64.3 33 84.8
CAN.G644.42 Capsicum annuum HOM05D001368 ORTHO05D003108 1.2e-08 63.9 53 62.3
Sc01g0004720 Simmondsia chinensis HOM05D001368 ORTHO05D003108 1.2e-08 63.9 53 62.3
Solyc11g066740.2 Solanum lycopersicum HOM05D001368 ORTHO05D003108 1.2e-08 63.9 53 62.3
Sopen11g026480 Solanum pennellii HOM05D001368 ORTHO05D003108 1.2e-08 63.9 53 62.3
PGSC0003DMG400000435 Solanum tuberosum HOM05D001368 ORTHO05D003108 1.2e-08 63.9 53 62.3
BcaB01g04694 Brassica carinata HOM05D001368 ORTHO05D003108 1.5e-08 63.5 33 87.9
CiPaw.13G142100 Carya illinoinensis HOM05D001368 ORTHO05D003108 1.5e-08 63.5 53 62.3
Migut.D02324 Erythranthe guttata HOM05D001368 ORTHO05D003108 1.5e-08 63.5 53 62.3
FAN25G3565 Fragaria x ananassa HOM05D001368 ORTHO05D003108 1.5e-08 63.5 33 84.8
SalBow6G5450 Salvia bowleyana HOM05D001368 ORTHO05D003108 1.5e-08 63.5 52 63.5
MSTRG.19058 Avicennia marina HOM05D001368 ORTHO05D003108 2.0e-08 63.2 82 45.1
BcaC01g06568 Brassica carinata HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
C03p12530 Brassica napus HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
BolC3t13721H Brassica oleracea HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
Ciclev10028580m.g Citrus clementina HOM05D001368 ORTHO05D003108 2.0e-08 63.2 53 60.4
Thhalv10013586m.g Eutrema salsugineum HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
Lj3A962T51 Lonicera japonica HOM05D001368 ORTHO05D003108 2.0e-08 63.2 53 62.3
Lalb_Chr22g0350561 Lupinus albus HOM05D001368 ORTHO05D003108 2.0e-08 63.2 53 60.4
Potri.009G150400 Populus trichocarpa HOM05D001368 ORTHO05D003108 2.0e-08 63.2 53 62.3
Sp6g22640 Schrenkiella parvula HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
Sc21g0004630 Simmondsia chinensis HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 81.8
THA.LOC104810892 Tarenaya hassleriana HOM05D001368 ORTHO05D003108 2.0e-08 63.2 33 84.8
TAR633G1378 Trochodendron aralioides HOM05D001368 ORTHO05D003108 2.0e-08 63.2 53 62.3
Cfa010101 Carpinus fangiana HOM05D001368 ORTHO05D003108 2.6e-08 62.8 33 84.8
Peaxi162Scf00789g00212 Petunia axillaris HOM05D001368 ORTHO05D003108 2.6e-08 62.8 53 60.4
QL07p028553 Quercus lobata HOM05D001368 ORTHO05D003108 2.6e-08 62.8 53 60.4
TWI75G1844 Tripterygium wilfordii HOM05D001368 ORTHO05D003108 2.6e-08 62.8 33 87.9
GSVIVG01034077001 Vitis vinifera HOM05D001368 ORTHO05D003108 2.6e-08 62.8 53 60.4
AUR62024940 Chenopodium quinoa HOM05D001368 ORTHO05D003108 3.3e-08 62.4 53 58.5
Dinv35549 Davidia involucrata HOM05D001368 ORTHO05D003108 3.3e-08 62.4 33 84.8
Oeu053776.1 Olea europaea HOM05D001368 ORTHO05D003108 3.3e-08 62.4 53 58.5
SGA_v2.0_scaffold193G40718 Striga asiatica HOM05D001368 ORTHO05D003108 3.3e-08 62.4 53 60.4
AL6G33810 Arabidopsis lyrata HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
AT5G22790 Arabidopsis thaliana HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
BcaB08g36408 Brassica carinata HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
BcaC04g19597 Brassica carinata HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
A03p10890 Brassica napus HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
A10p18220 Brassica napus HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
C09p53830 Brassica napus HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
BolC9t58259H Brassica oleracea HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
BraA03t10399Z Brassica rapa HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
BraA10t43897Z Brassica rapa HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
Carub.0006s2050 Capsella rubella HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
CARHR190810 Cardamine hirsuta HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
Dinv37128 Davidia involucrata HOM05D001368 ORTHO05D003108 4.4e-08 62.0 33 81.8
Actinidia13160 Actinidia chinensis HOM05D001368 ORTHO05D003108 5.7e-08 61.6 53 62.3
Gohir.A09G091900 Gossypium hirsutum HOM05D001368 ORTHO05D003108 5.7e-08 61.6 52 61.5
Ca_01688_v3 Cicer arietinum L. HOM05D001368 ORTHO05D003108 7.5e-08 61.2 70 52.9
Cc06_g02160 Coffea canephora HOM05D001368 ORTHO05D003108 7.5e-08 61.2 53 60.4
Haze_23467 Corylus avellana HOM05D001368 ORTHO05D003108 7.5e-08 61.2 33 84.8
Medtr2g084605 Medicago truncatula HOM05D001368 ORTHO05D003108 7.5e-08 61.2 53 62.3
CSS0027244 Camellia sinensis var. sinensis HOM05D001368 ORTHO05D003108 9.7e-08 60.8 53 56.6
Migut.J00274 Erythranthe guttata HOM05D001368 ORTHO05D003108 9.7e-08 60.8 35 74.3
PSO782G3471 Papaver somniferum HOM05D001368 ORTHO05D003108 9.7e-08 60.8 53 60.4
VMungo1383G0432 Vigna mungo HOM05D001368 ORTHO05D003108 9.7e-08 60.8 53 58.5
Phvul.008G114600 Phaseolus vulgaris HOM05D001368 ORTHO05D003108 1.3e-07 60.5 53 58.5
Prupe.6G263400 Prunus persica HOM05D001368 ORTHO05D003108 1.3e-07 60.5 53 58.5
AUR62030604 Chenopodium quinoa HOM05D001368 ORTHO05D003108 1.7e-07 60.1 53 56.6
Lsat_1_v5_gn_2_96641 Lactuca sativa HOM05D001368 ORTHO05D003108 1.7e-07 60.1 53 60.4
MD04G1137400 Malus domestica HOM05D001368 ORTHO05D003108 1.7e-07 60.1 53 58.5
Glyma.12G180500 Glycine max HOM05D001368 ORTHO05D003108 2.2e-07 59.7 53 58.5
Hma1.2p1_1498F.1_g287140 Hydrangea macrophylla HOM05D001368 ORTHO05D003108 2.2e-07 59.7 53 58.5
Oeu023728.2 Olea europaea HOM05D001368 ORTHO05D003108 2.2e-07 59.7 33 81.8
PSO478G4388 Papaver somniferum HOM05D001368 ORTHO05D003108 2.2e-07 59.7 53 58.5
Hund11324 Selenicereus undatus HOM05D001368 ORTHO05D003108 2.2e-07 59.7 53 58.5
Hund14495 Selenicereus undatus HOM05D001368 ORTHO05D003108 2.2e-07 59.7 53 56.6
Eucgr.B02721 Eucalyptus grandis HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 58.5
FvH4_6g12860 Fragaria vesca HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 58.5
FAN02G3410 Fragaria x ananassa HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 58.5
FAN05G5556 Fragaria x ananassa HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 58.5
Glyma.07G138400 Glycine max HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 56.6
Glyma.18G188800 Glycine max HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 56.6
RcHm_v2.0_Chr3g0464891 Rosa chinensis HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 58.5
GSVIVG01031414001 Vitis vinifera HOM05D001368 ORTHO05D003108 2.8e-07 59.3 53 60.4
EL10Ac2g02655 Beta vulgaris HOM05D001368 ORTHO05D003108 3.7e-07 58.9 53 58.5
Cfa017310 Carpinus fangiana HOM05D001368 ORTHO05D003108 3.7e-07 58.9 33 78.8
CDE07G0990 Ceratophyllum demersum HOM05D001368 ORTHO05D003108 3.7e-07 58.9 98 37.8
Ah.12g064400 Amaranthus hybridus HOM05D001368 ORTHO05D003108 4.8e-07 58.5 49 57.1
CiPaw.09G199900 Carya illinoinensis HOM05D001368 ORTHO05D003108 4.8e-07 58.5 53 60.4
Haze_20871 Corylus avellana HOM05D001368 ORTHO05D003108 4.8e-07 58.5 33 75.8
SGA_v2.0_scaffold75G24972 Striga asiatica HOM05D001368 ORTHO05D003108 4.8e-07 58.5 53 54.7
VMungo1080G1333 Vigna mungo HOM05D001368 ORTHO05D003108 4.8e-07 58.5 52 59.6
Aa31LG1G12910 Aethionema arabicum HOM05D001368 ORTHO05D003108 6.3e-07 58.2 30 86.7
Rhsim13G0104400 Rhododendron simsii HOM05D001368 ORTHO05D003108 6.3e-07 58.2 53 58.5
Lj3g0010561 Lotus japonicus HOM05D001368 ORTHO05D003108 8.2e-07 57.8 53 56.6
Phvul.005G128300 Phaseolus vulgaris HOM05D001368 ORTHO05D003108 8.2e-07 57.8 32 81.2
TPR.G27950 Trifolium pratense HOM05D001368 ORTHO05D003108 8.2e-07 57.8 53 54.7
TPR.G32381 Trifolium pratense HOM05D001368 ORTHO05D003108 8.2e-07 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.24KS4K Arachis hypogaea HOM05D001368 ORTHO05D003108 1.1e-06 57.4 33 75.8
arahy.Tifrunner.gnm1.ann1.Y2PT15 Arachis hypogaea HOM05D001368 ORTHO05D003108 1.1e-06 57.4 33 75.8
Ciclev10011995m.g Citrus clementina HOM05D001368 ORTHO05D003108 1.1e-06 57.4 53 58.5
PGR102G0092 Punica granatum HOM05D001368 ORTHO05D003108 1.1e-06 57.4 53 56.6
PGR102G3113 Punica granatum HOM05D001368 ORTHO05D003108 1.1e-06 57.4 53 58.5
TAR623G0826 Trochodendron aralioides HOM05D001368 ORTHO05D003108 1.1e-06 57.4 52 57.7
Lalb_Chr19g0125131 Lupinus albus HOM05D001368 ORTHO05D003108 1.4e-06 57.0 53 52.8
DCAR_024053 Daucus carota HOM05D001368 ORTHO05D003108 1.8e-06 56.6 33 72.7
Aqoxy2G02364 Aquilegia oxysepala HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 56.6
arahy.Tifrunner.gnm1.ann1.FMIT1J Arachis hypogaea HOM05D001368 ORTHO05D003108 2.4e-06 56.2 33 75.8
arahy.Tifrunner.gnm1.ann1.NPHB92 Arachis hypogaea HOM05D001368 ORTHO05D003108 2.4e-06 56.2 33 75.8
EL10Ac9g21054 Beta vulgaris HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 54.7
Ca_26602_v3 Cicer arietinum L. HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 52.8
Haze_08693 Corylus avellana HOM05D002964 ORTHO05D013268 2.4e-06 56.2 82 39.0
Glyma.13G320300 Glycine max HOM05D001368 ORTHO05D003108 2.4e-06 56.2 33 72.7
Medtr7g064130 Medicago truncatula HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 52.8
Nn2g11270 Nelumbo nucifera HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 54.7
Psat3g133000 Pisum sativum HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 52.8
Psat5g254080 Pisum sativum HOM05D001368 ORTHO05D003108 2.4e-06 56.2 53 58.5
Sed0010132 Sechium edule HOM05D001368 ORTHO05D003108 2.4e-06 56.2 50 58.0
Nn7g37469 Nelumbo nucifera HOM05D001368 ORTHO05D003108 3.1e-06 55.8 53 50.9
Lalb_Chr03g0042571 Lupinus albus HOM05D001368 ORTHO05D003108 4.1e-06 55.5 53 50.9
Ah.01g004670 Amaranthus hybridus HOM05D001368 ORTHO05D003108 5.3e-06 55.1 53 52.8
Ah.01g016700 Amaranthus hybridus HOM05D000929 ORTHO05D004137 5.3e-06 55.1 53 52.8
AUR62031764 Chenopodium quinoa HOM05D001368 ORTHO05D003108 5.3e-06 55.1 53 52.8
PSO675G2144 Papaver somniferum HOM05D001368 ORTHO05D003108 5.3e-06 55.1 53 56.6
ATR0559G260 Amborella trichopoda HOM05D001368 ORTHO05D003108 7.0e-06 54.7 52 55.8
CANSAT21G1582 Cannabis sativa HOM05D002964 ORTHO05D013268 7.0e-06 54.7 104 42.3
Cfa012865 Carpinus fangiana HOM05D002964 ORTHO05D013268 7.0e-06 54.7 82 37.8
Rhsim04G0162800 Rhododendron simsii HOM05D001368 ORTHO05D003108 7.0e-06 54.7 50 58.0
Cpa.g.sc56.47 Carica papaya HOM05D001368 ORTHO05D003108 9.1e-06 54.3 53 54.7
FAN16G3298 Fragaria x ananassa HOM05D001368 ORTHO05D003108 9.1e-06 54.3 72 47.2
unitig_747.g21967 Utricularia gibba HOM05D001368 ORTHO05D003108 9.1e-06 54.3 52 55.8


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