Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G166600 Prunus persica HOM05D000429 ORTHO05D000352 8.5e-54 213.4 106 100.0
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-15 86.7 105 37.1
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-15 86.7 105 37.1
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 3.5e-15 85.1 105 36.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 3.9e-14 81.6 105 35.2
CSS0037010 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-13 80.1 105 37.1
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-13 78.6 105 35.2
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-13 78.6 105 35.2
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.6e-13 77.8 105 35.2
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.6e-13 77.8 105 35.2
CSS0021795 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.3e-13 77.4 105 36.2
CSS0014631 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.6e-12 76.3 105 35.2
CSS0025671 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.8e-12 75.5 105 36.2
FvH4_6g11891 Fragaria vesca HOM05D000429 ORTHO05D000352 4.7e-12 74.7 105 34.3
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.1e-11 73.6 105 34.3
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-11 72.8 105 35.2
CANSAT01G0251 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-11 71.6 94 34.0
AUR62023870 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.2e-11 71.2 103 35.0
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 6.8e-11 70.9 89 38.2
CSS0002712 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-10 70.1 105 33.3
CSS0043325 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-10 70.1 105 33.3
CANSAT35G1271 Cannabis sativa HOM05D000429 ORTHO05D000352 2.0e-10 69.3 105 29.5
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-10 68.6 105 32.4
AUR62024397 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.4e-10 68.2 103 33.0
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 5.8e-10 67.8 105 34.3
AUR62022263 Chenopodium quinoa HOM05D008320 ORTHO05D000352 7.6e-10 67.4 103 32.0
Oeu008639.1 Olea europaea HOM05D000429 ORTHO05D000352 9.9e-10 67.0 105 33.3
AUR62021090 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.3e-09 66.6 103 32.0
AUR62040873 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.3e-09 66.6 99 33.3
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 1.7e-09 66.2 105 31.4
CANSAT71G0013 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-09 66.2 105 29.5
AUR62004864 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.7e-09 66.2 101 30.7
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 2.9e-09 65.5 105 33.3
AUR62013405 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.9e-09 65.5 104 26.9
Oeu024566.2 Olea europaea HOM05D000047 ORTHO05D000044 2.9e-09 65.5 105 33.3
CANSAT01G2525 Cannabis sativa HOM05D000429 ORTHO05D000352 4.9e-09 64.7 75 41.3
ECA238G1039 Erigeron canadensis HOM05D000047 ORTHO05D002578 4.9e-09 64.7 106 34.9
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 6.4e-09 64.3 105 32.4
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 8.4e-09 63.9 105 30.5
AUR62021967 Chenopodium quinoa HOM05D000429 ORTHO05D000352 8.4e-09 63.9 103 31.1
AUR62002668 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.1e-08 63.5 103 32.0
CANSAT11G2636 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-08 63.2 104 31.7
CANSAT35G1116 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-08 63.2 105 29.5
CANSAT01G2005 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-08 62.8 100 31.0
AUR62041273 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.9e-08 62.8 103 30.1
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 2.4e-08 62.4 105 31.4
ECA234G4068 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-08 62.4 106 32.1
Oeu018836.1 Olea europaea HOM05D000429 ORTHO05D000352 2.4e-08 62.4 105 32.4
Oeu033154.2 Olea europaea HOM05D000047 ORTHO05D000352 2.4e-08 62.4 105 32.4
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 3.2e-08 62.0 104 31.7
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 3.2e-08 62.0 105 31.4
SGA_v2.0_scaffold182G39842 Striga asiatica HOM05D000429 ORTHO05D000352 3.2e-08 62.0 103 29.1
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 4.1e-08 61.6 104 33.7
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 4.1e-08 61.6 100 32.0
AUR62042094 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.1e-08 61.6 103 29.1
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 5.4e-08 61.2 104 32.7
AUR62035460 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.4e-08 61.2 101 28.7
AUR62040874 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.4e-08 61.2 90 30.0
AUR62044001 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.4e-08 61.2 104 25.0
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 7.1e-08 60.8 100 31.0
CANSAT54G1303 Cannabis sativa HOM05D001646 ORTHO05D001572 7.1e-08 60.8 100 31.0
MBI05_g00166_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 7.1e-08 60.8 86 34.9
MBI08_g16120_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 7.1e-08 60.8 102 28.4
CANSAT25G2129 Cannabis sativa HOM05D000429 ORTHO05D000352 9.2e-08 60.5 100 32.0
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 9.2e-08 60.5 105 31.4
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 9.2e-08 60.5 105 30.5
CANSAT80G1770 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-07 59.7 105 30.5
AUR62032694 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.6e-07 59.7 81 35.8
MBI11_g43379_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.6e-07 59.7 74 37.8
CANSAT01G1463 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-07 59.3 99 33.3
CANSAT54G0136 Cannabis sativa HOM05D000429 ORTHO05D000352 2.7e-07 58.9 100 31.0
AUR62034884 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.5e-07 58.5 103 30.1
MBI12_g31048_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 3.5e-07 58.5 86 34.9
CANSAT80G0915 Cannabis sativa HOM05D000047 ORTHO05D000044 4.6e-07 58.2 86 32.6
CANSAT80G2076 Cannabis sativa HOM05D000429 ORTHO05D000352 4.6e-07 58.2 102 32.4
ECA238G4641 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.6e-07 58.2 108 30.6
CANSAT35G0492 Cannabis sativa HOM05D000047 ORTHO05D000044 7.8e-07 57.4 86 33.7
CANSAT35G1581 Cannabis sativa HOM05D000429 ORTHO05D000352 7.8e-07 57.4 80 35.0
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 7.8e-07 57.4 86 33.7
arahy.Tifrunner.gnm1.ann1.E3E3WX Arachis hypogaea HOM05D000429 ORTHO05D000352 1.0e-06 57.0 105 28.6
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 1.0e-06 57.0 99 29.3
CANSAT25G3712 Cannabis sativa HOM05D000429 ORTHO05D000352 1.0e-06 57.0 100 30.0
MBI05_g37662_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.0e-06 57.0 78 34.6
MBI12_g41818_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.0e-06 57.0 96 32.3
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 1.3e-06 56.6 105 25.7
AUR62038495 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.3e-06 56.6 104 25.0
ECA232G1116 Erigeron canadensis HOM05D000047 ORTHO05D000004 1.3e-06 56.6 106 29.2
ECA240G2638 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.7e-06 56.2 108 30.6
CANSAT35G0743 Cannabis sativa HOM05D000429 ORTHO05D000352 2.3e-06 55.8 89 32.6
AUR62042050 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.3e-06 55.8 104 25.0
MBI05_g39740_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 2.3e-06 55.8 75 33.3
ECA233G1472 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.0e-06 55.5 108 29.6
ECA234G2506 Erigeron canadensis HOM05D000047 ORTHO05D002578 3.0e-06 55.5 108 32.4
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-06 55.1 106 31.1
FvH4_4g05724 Fragaria vesca HOM05D000429 ORTHO05D000352 3.9e-06 55.1 93 30.1
PSO455G0267 Papaver somniferum HOM05D000429 ORTHO05D000352 3.9e-06 55.1 105 25.7
CANSAT80G1350 Cannabis sativa HOM05D000429 ORTHO05D000352 5.1e-06 54.7 101 28.7
AUR62041344 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.1e-06 54.7 96 29.2
AUR62042598 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.1e-06 54.7 91 26.4
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.6e-06 54.3 105 26.7
AUR62027250 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.6e-06 54.3 81 37.0
AUR62035765 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.6e-06 54.3 104 23.1
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 6.6e-06 54.3 99 30.3
ECA233G0268 Erigeron canadensis HOM05D000047 ORTHO05D002578 6.6e-06 54.3 108 29.6
ECA233G6019 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.6e-06 54.3 106 30.2
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.6e-06 54.3 108 29.6
ECA240G3916 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.6e-06 54.3 106 31.1
PSO170G1250 Papaver somniferum HOM05D000429 ORTHO05D000352 6.6e-06 54.3 91 27.5
ECA233G1128 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.6e-06 53.9 108 29.6
ECA246G3590 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.6e-06 53.9 108 30.6


User provided reference genes

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