Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G164500 Prunus persica HOM05D007422 ORTHO05D009333 2.8e-54 215.3 130 100.0
Prupe.6G165000 Prunus persica HOM05D007422 ORTHO05D009333 1.4e-50 203.0 130 86.2
RcHm_v2.0_Chr2g0118261 Rosa chinensis HOM05D007422 ORTHO05D009333 8.0e-38 160.6 128 74.2
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 2.6e-36 155.6 127 68.5
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 2.6e-36 155.6 127 68.5
MD05G1015900 Malus domestica HOM05D007422 ORTHO05D009333 3.4e-36 155.2 129 69.8
Manes.12G151600 Manihot esculenta HOM05D007422 ORTHO05D009333 5.8e-36 154.5 129 65.9
Potri.005G056500 Populus trichocarpa HOM05D007422 ORTHO05D009333 5.8e-36 154.5 129 68.2
CiPaw.04G085200 Carya illinoinensis HOM05D007422 ORTHO05D009333 7.5e-36 154.1 130 69.2
Dinv18494 Davidia involucrata HOM05D007422 ORTHO05D009333 7.5e-36 154.1 129 67.4
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 1.3e-35 153.3 129 69.0
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 2.9e-35 152.1 127 68.5
Manes.12G151400 Manihot esculenta HOM05D007422 ORTHO05D009333 4.9e-35 151.4 129 65.1
Thecc.01G123800 Theobroma cacao HOM05D007422 ORTHO05D009333 8.3e-35 150.6 127 69.3
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 1.4e-34 149.8 127 66.1
FAN19G2306 Fragaria x ananassa HOM05D007422 ORTHO05D009333 2.4e-34 149.1 131 77.9
FvH4_1g23360 Fragaria vesca HOM05D007422 ORTHO05D009333 3.2e-34 148.7 128 78.9
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 1.3e-32 143.3 130 63.1
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 1.3e-32 143.3 129 64.3
vmacro18659 Vaccinium macrocarpon HOM05D007422 ORTHO05D009333 5.1e-32 141.4 130 63.1
TAR628G0864 Trochodendron aralioides HOM05D007422 ORTHO05D009333 8.6e-32 140.6 127 64.6
QL06p030244 Quercus lobata HOM05D007422 ORTHO05D009333 1.1e-31 140.2 136 61.0
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 1.5e-31 139.8 134 59.0
MSTRG.2680 Avicennia marina HOM05D007422 ORTHO05D009333 2.5e-31 139.0 127 61.4
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 3.3e-31 138.7 130 61.5
Cc07_g17580 Coffea canephora HOM05D007422 ORTHO05D009333 4.3e-31 138.3 128 63.3
MELO3C023262.2 Cucumis melo HOM05D007422 ORTHO05D009333 4.3e-31 138.3 125 64.8
PGR102G2924 Punica granatum HOM05D007422 ORTHO05D009333 4.3e-31 138.3 127 60.6
Lalb_Chr08g0238531 Lupinus albus HOM05D007422 ORTHO05D009333 7.3e-31 137.5 128 62.5
TPR.G18719 Trifolium pratense HOM05D007422 ORTHO05D009333 7.3e-31 137.5 127 62.2
VMungo1309G2444 Vigna mungo HOM05D007422 ORTHO05D009333 7.3e-31 137.5 127 62.2
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 9.5e-31 137.1 130 65.4
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 9.5e-31 137.1 128 62.5
CANSAT01G0526 Cannabis sativa HOM05D007422 ORTHO05D009333 1.2e-30 136.7 127 62.2
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 1.2e-30 136.7 127 63.8
Solyc03g078350.3 Solanum lycopersicum HOM05D007422 ORTHO05D009333 2.1e-30 136.0 127 60.6
Medtr3g095670 Medicago truncatula HOM05D007422 ORTHO05D009333 2.8e-30 135.6 127 64.6
Psat5g063240 Pisum sativum HOM05D007422 ORTHO05D009333 2.8e-30 135.6 127 63.0
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 2.8e-30 135.6 127 61.4
CDE08G0547 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 4.7e-30 134.8 127 59.8
TWI31G1366 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 4.7e-30 134.8 127 61.4
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 6.2e-30 134.4 136 59.6
Ciclev10026766m.g Citrus clementina HOM05D007422 ORTHO05D009333 6.2e-30 134.4 128 60.2
Nitab4.5_0006443g0040 Nicotiana tabacum HOM05D007422 ORTHO05D009333 6.2e-30 134.4 127 60.6
Sopen03g021130 Solanum pennellii HOM05D007422 ORTHO05D009333 8.1e-30 134.0 127 59.8
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 1.1e-29 133.7 130 64.6
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 1.1e-29 133.7 130 59.2
Glyma.04G215300 Glycine max HOM05D007422 ORTHO05D009333 1.1e-29 133.7 127 61.4
Phvul.009G147900 Phaseolus vulgaris HOM05D007422 ORTHO05D009333 1.1e-29 133.7 127 59.1
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 1.1e-29 133.7 134 61.2
Nn1g06132 Nelumbo nucifera HOM05D007422 ORTHO05D009333 1.4e-29 133.3 130 60.8
arahy.Tifrunner.gnm1.ann1.DL1AJH Arachis hypogaea HOM05D007422 ORTHO05D009333 1.8e-29 132.9 127 59.8
Oeu039761.1 Olea europaea HOM05D007422 ORTHO05D009333 1.8e-29 132.9 128 61.7
Migut.H01100 Erythranthe guttata HOM05D007422 ORTHO05D009333 2.3e-29 132.5 125 60.8
CDE06G1708 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 3.1e-29 132.1 121 57.9
Glyma.06G150900 Glycine max HOM05D007422 ORTHO05D009333 3.1e-29 132.1 127 59.1
Lj1g0018544 Lotus japonicus HOM05D007422 ORTHO05D009333 4.0e-29 131.7 127 60.6
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 8.9e-29 130.6 130 57.7
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 8.9e-29 130.6 130 57.7
PGSC0003DMG400018421 Solanum tuberosum HOM05D007422 ORTHO05D009333 8.9e-29 130.6 128 57.8
PSO170G3514 Papaver somniferum HOM05D007422 ORTHO05D009333 1.2e-28 130.2 129 56.6
arahy.Tifrunner.gnm1.ann1.PIK6SY Arachis hypogaea HOM05D007422 ORTHO05D009333 1.5e-28 129.8 127 60.6
HanXRQChr17g0559811 Helianthus annuus HOM05D007422 ORTHO05D009333 1.5e-28 129.8 124 57.3
Lsat_1_v5_gn_8_142161 Lactuca sativa HOM05D007422 ORTHO05D009333 1.5e-28 129.8 122 59.0
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 2.6e-28 129.0 133 60.2
Sabra05G0048800 Salix brachista HOM05D007422 ORTHO05D009333 2.6e-28 129.0 140 59.3
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 4.4e-28 128.3 130 56.9
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 4.4e-28 128.3 130 56.9
MBI17_g11164_MAGBIO Magnolia biondii HOM05D007422 ORTHO05D009333 5.8e-28 127.9 100 66.0
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 9.9e-28 127.1 133 59.4
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 9.9e-28 127.1 133 59.4
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 1.7e-27 126.3 127 59.8
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 2.2e-27 125.9 128 56.2
DCAR_031485 Daucus carota HOM05D007422 ORTHO05D009333 8.3e-27 124.0 124 55.6
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 8.3e-27 124.0 125 58.4
ECA233G2273 Erigeron canadensis HOM05D002719 ORTHO05D002938 3.2e-26 122.1 107 61.7
Ca_16922_v3 Cicer arietinum L. HOM05D007422 ORTHO05D009333 7.1e-26 120.9 127 58.3
PSO017G6029 Papaver somniferum HOM05D007422 ORTHO05D009333 1.6e-25 119.8 131 52.7
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 2.7e-25 119.0 124 53.2
Peaxi162Scf00583g00227 Petunia axillaris HOM05D007422 ORTHO05D009333 1.3e-24 116.7 128 54.7
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 2.3e-24 115.9 127 51.2
Zm00001eb076010 Zea mays HOM05D007422 ORTHO05D009333 2.3e-24 115.9 125 52.0
Sc03g0005110 Simmondsia chinensis HOM05D007422 ORTHO05D009333 5.1e-24 114.8 144 49.3
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 1.5e-23 113.2 126 51.6
Os04g0686300 Oryza sativa ssp. japonica HOM05D007422 ORTHO05D009333 5.6e-23 111.3 130 50.0
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 9.5e-23 110.5 129 48.1
BcaB02g11281 Brassica carinata HOM05D007422 ORTHO05D009333 1.3e-19 100.1 130 49.2
AUR62003614 Chenopodium quinoa HOM05D007422 ORTHO05D009333 9.2e-18 94.0 128 47.7
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 5.1e-16 88.2 100 44.0
GSVIVG01026559001 Vitis vinifera HOM05D007422 ORTHO05D009333 1.5e-15 86.7 75 65.3
EL10Ac6g15266 Beta vulgaris HOM05D007422 ORTHO05D009333 1.9e-15 86.3 77 59.7
CsaV3_2G018110 Cucumis sativus L. HOM05D007422 ORTHO05D009333 3.3e-15 85.5 71 64.8
Eucgr.H04923 Eucalyptus grandis HOM05D007422 ORTHO05D009333 5.6e-15 84.7 69 66.7
CSS0008685 Camellia sinensis var. sinensis HOM05D007422 ORTHO05D009333 7.3e-15 84.3 76 63.2
Haze_25151 Corylus avellana HOM05D007422 ORTHO05D009333 2.8e-14 82.4 74 63.5
Sed0005171 Sechium edule HOM05D007422 ORTHO05D009333 2.8e-14 82.4 113 46.9
ClCG02G000660 Citrullus lanatus HOM05D007422 ORTHO05D009333 3.1e-13 79.0 72 62.5
Dinv05702 Davidia involucrata HOM05D007422 ORTHO05D009333 7.6e-12 74.3 67 62.7
FAN23G3068 Fragaria x ananassa HOM05D007422 ORTHO05D009333 6.4e-11 71.2 57 73.7
AUR62017925 Chenopodium quinoa HOM05D007422 ORTHO05D009333 5.4e-10 68.2 72 56.9
RcHm_v2.0_Chr2g0118341 Rosa chinensis HOM05D007422 ORTHO05D009333 2.1e-09 66.2 41 85.4
Sabra05G0049000 Salix brachista HOM05D007422 ORTHO05D009333 5.1e-08 61.6 49 71.4
BcaB02g11285 Brassica carinata HOM05D007422 ORTHO05D009333 8.1e-06 54.3 104 41.3


User provided reference genes

Program Settings