Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.2e-43 179.5 94 100.0
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 3.1e-39 164.9 94 88.3
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.9e-39 163.7 94 89.4
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.9e-39 163.7 94 89.4
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 6.9e-39 163.7 94 89.4
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 88.3
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 4.5e-38 161.0 94 87.2
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 86.2
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.2e-37 158.7 94 85.1
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.2e-37 158.7 94 85.1
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 2.2e-37 158.7 88 90.9
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 2.9e-37 158.3 94 85.1
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 2.9e-37 158.3 93 83.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 2.9e-37 158.3 94 85.1
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 4.9e-37 157.5 94 84.0
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.9e-37 157.5 94 84.0
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 83.0
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 84.0
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 84.0
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.4e-36 155.2 88 89.8
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.4e-36 155.2 88 89.8
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 84.0
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 3.2e-36 154.8 94 83.0
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 3.2e-36 154.8 94 80.9
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 3.2e-36 154.8 94 81.9
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 9.3e-36 153.3 95 84.2
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 84.0
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 84.0
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 83.0
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 80.9
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.6e-35 152.5 86 88.4
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 2.7e-35 151.8 94 83.0
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.5e-35 151.4 94 83.0
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.6e-35 151.0 95 84.2
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.6e-35 151.0 87 85.1
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 6.0e-35 150.6 86 86.0
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 7.9e-35 150.2 90 83.3
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 7.9e-35 150.2 95 82.1
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.3e-34 149.4 90 81.1
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.8e-34 149.1 94 80.9
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 3.0e-34 148.3 94 78.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 3.0e-34 148.3 94 78.7
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 3.0e-34 148.3 94 77.7
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 3.0e-34 148.3 93 81.7
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 78.7
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 83.0
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.9e-34 147.9 86 84.9
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 6.7e-34 147.1 93 77.4
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 77.7
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 79.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 8.7e-34 146.7 94 79.8
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.1e-33 146.4 81 87.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.5e-33 146.0 92 79.3
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 76.6
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 76.6
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.9e-33 145.6 92 79.3
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.9e-33 145.6 94 78.7
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 4.3e-33 144.4 80 87.5
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 7.4e-33 143.7 80 87.5
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 7.4e-33 143.7 86 83.7
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 85 82.4
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 90 80.0
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.3e-32 142.9 90 80.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.3e-32 142.9 89 79.8
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.1e-32 142.1 85 81.2
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 6.2e-32 140.6 94 73.4
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 8.1e-32 140.2 92 80.4
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 8.1e-32 140.2 85 81.2
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.8e-31 139.0 86 81.4
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 3.1e-31 138.3 93 78.5
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 4.0e-31 137.9 91 74.7
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 5.3e-31 137.5 92 78.3
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 5.3e-31 137.5 86 77.9
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 6.9e-31 137.1 91 73.6
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 6.9e-31 137.1 91 75.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 9.0e-31 136.7 79 87.3
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 2.6e-30 135.2 79 84.8
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 2.6e-30 135.2 86 76.7
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 3.4e-30 134.8 84 81.0
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 3.4e-30 134.8 84 81.0
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 3.4e-30 134.8 84 81.0
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 3.4e-30 134.8 84 81.0
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 3.4e-30 134.8 92 75.0
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 7.6e-30 133.7 94 74.5
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 9.9e-30 133.3 84 79.8
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.2e-29 132.1 83 78.3
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 4.9e-29 131.0 88 72.7
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 4.9e-29 131.0 93 71.0
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.1e-28 129.8 94 71.3
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 1.4e-28 129.4 159 50.9
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 1.6e-27 125.9 74 87.8
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.6e-27 125.9 83 74.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 3.5e-27 124.8 86 70.9
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 4.6e-27 124.4 73 87.7
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.3e-26 122.9 83 71.1
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.8e-26 122.5 73 84.9
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 2.3e-26 122.1 73 84.9
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 8.7e-26 120.2 90 70.0
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.5e-25 119.4 93 68.8
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.9e-25 119.0 77 79.2
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.3e-25 118.2 72 83.3
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.6e-25 117.5 73 78.1
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.3e-24 116.3 88 69.3
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 1.3e-24 116.3 73 78.1
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.3e-24 116.3 73 80.8
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.6e-24 115.9 73 79.5
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 2.4e-23 112.1 76 76.3
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.5e-22 109.4 73 76.7
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 1.0e-21 106.7 69 75.4
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.7e-21 105.9 64 81.2
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.2e-21 105.5 72 72.2
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 2.5e-20 102.1 80 65.0
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-19 99.8 84 64.3
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.1e-18 94.4 79 60.8
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.9e-17 92.4 71 71.8
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.8e-15 85.9 108 48.1
Zm00001eb333130 Zea mays HOM05D002854 ORTHO05D003051 2.6e-06 55.5 90 43.3


User provided reference genes

Program Settings