Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G161200 Prunus persica HOM05D009414 ORTHO05D010503 1.0e-40 169.9 98 100.0
QL06p036391 Quercus lobata HOM05D009414 ORTHO05D010503 1.2e-12 76.6 98 51.0
QL06p031201 Quercus lobata HOM05D009414 ORTHO05D010503 2.0e-12 75.9 98 51.0
Atru.chr4.624 Acer truncatum HOM05D009414 ORTHO05D010503 2.6e-12 75.5 83 51.8
Haze_25097 Corylus avellana HOM05D009414 ORTHO05D010503 9.8e-12 73.6 98 50.0
Haze_25098 Corylus avellana HOM05D009414 ORTHO05D010503 9.8e-12 73.6 98 50.0
Potri.007G076600 Populus trichocarpa HOM05D009414 ORTHO05D010503 9.8e-12 73.6 99 47.5
Haze_25096 Corylus avellana HOM05D009414 ORTHO05D010503 1.3e-11 73.2 96 51.0
Haze_25094 Corylus avellana HOM05D009414 ORTHO05D010503 1.7e-11 72.8 95 51.6
Manes.12G146500 Manihot esculenta HOM05D009414 ORTHO05D010503 2.8e-11 72.0 103 45.6
Cfa002797 Carpinus fangiana HOM05D009414 ORTHO05D010503 3.7e-11 71.6 99 61.6
Cfa002796 Carpinus fangiana HOM05D009414 ORTHO05D010503 8.3e-11 70.5 96 49.0
FvH4_1g23900 Fragaria vesca HOM05D025105 ORTHO05D010503 5.4e-10 67.8 95 48.4
FAN19G1081 Fragaria x ananassa HOM05D025105 ORTHO05D010503 7.0e-10 67.4 95 49.5
FAN28G2363 Fragaria x ananassa HOM05D025105 ORTHO05D010503 7.0e-10 67.4 98 49.0
FAN23G0066 Fragaria x ananassa HOM05D025105 ORTHO05D010503 9.1e-10 67.0 97 47.4
TAR628G0878 Trochodendron aralioides HOM05D009414 ORTHO05D010503 1.2e-09 66.6 95 42.1
Sabra07G0064500 Salix brachista HOM05D009414 ORTHO05D010503 1.6e-09 66.2 100 43.0
FAN26G1274 Fragaria x ananassa HOM05D025105 ORTHO05D010503 2.0e-09 65.9 97 58.8
Lalb_Chr13g0296371 Lupinus albus HOM05D015285 ORTHO05D010503 2.7e-09 65.5 108 48.1
Sed0000016 Sechium edule HOM05D024000 ORTHO05D010503 3.5e-09 65.1 110 41.8
Sed0002367 Sechium edule HOM05D024000 ORTHO05D010503 4.5e-09 64.7 103 41.7
Glyma.08G145500 Glycine max HOM05D015285 ORTHO05D010503 5.9e-09 64.3 90 46.7
CiPaw.03G130700 Carya illinoinensis HOM05D009414 ORTHO05D010503 2.2e-08 62.4 61 57.4
TAR381G0777 Trochodendron aralioides HOM05D009414 ORTHO05D010503 6.5e-08 60.8 96 52.1
TAR381G0868 Trochodendron aralioides HOM05D009414 ORTHO05D010503 6.5e-08 60.8 96 52.1
QL06p031208 Quercus lobata HOM05D009414 ORTHO05D010503 3.2e-07 58.5 89 57.3
Glyma.05G187200 Glycine max HOM05D015285 ORTHO05D010503 4.2e-07 58.2 91 42.9
Phvul.002G268100 Phaseolus vulgaris HOM05D015285 ORTHO05D010503 5.5e-07 57.8 89 41.6
VMungo0251G1892 Vigna mungo HOM05D015285 ORTHO05D010503 5.5e-07 57.8 90 42.2
Ciclev10027346m.g Citrus clementina HOM05D009414 ORTHO05D010503 7.2e-07 57.4 48 60.4
ClCG01G015770 Citrullus lanatus HOM05D024000 ORTHO05D010503 9.4e-07 57.0 58 51.7
Manes.13G081600 Manihot esculenta HOM05D009414 ORTHO05D010503 2.1e-06 55.8 90 56.7
Nn1g06054 Nelumbo nucifera HOM05D009414 ORTHO05D010503 2.1e-06 55.8 67 46.3
Atru.chr4.625 Acer truncatum HOM05D009414 ORTHO05D010503 2.7e-06 55.5 49 59.2
Cpa.g.sc1356.2 Carica papaya HOM05D050654 ORTHO05D010503 4.7e-06 54.7 87 41.4
Ciclev10027329m.g Citrus clementina HOM05D009414 ORTHO05D010503 4.7e-06 54.7 87 54.0
CiPaw.04G087800 Carya illinoinensis HOM05D009414 ORTHO05D010503 6.1e-06 54.3 37 70.3
Nn5g28782 Nelumbo nucifera HOM05D009414 ORTHO05D010503 6.1e-06 54.3 96 37.5


User provided reference genes

Program Settings