Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 7.8e-64 246.9 119 100.0
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 4.6e-48 194.5 119 81.5
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 4.2e-33 144.8 117 65.0
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 5.1e-31 137.9 117 61.5
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 5.1e-31 137.9 117 61.5
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 6.7e-31 137.5 117 62.4
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 1.0e-26 123.6 123 57.7
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.2e-18 95.9 131 43.5
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 5.0e-18 94.7 109 50.5
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.1e-17 93.6 105 48.6
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.2e-17 92.0 95 56.8
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 3.6e-16 88.6 131 42.0
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 4.6e-16 88.2 132 40.2
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 2.3e-15 85.9 124 41.9
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 2.2e-13 79.3 127 38.6
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 3.7e-13 78.6 130 39.2
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 6.3e-13 77.8 102 39.2
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 2.4e-12 75.9 131 38.9
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.2e-11 73.6 112 37.5
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 3.8e-10 68.6 110 36.4
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 1.9e-09 66.2 126 34.1
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 9.4e-09 63.9 126 33.3
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 1.2e-08 63.5 102 37.3
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 1.6e-08 63.2 108 37.0
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 4.7e-08 61.6 106 38.7
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 4.7e-08 61.6 105 36.2
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 7.9e-08 60.8 123 30.9
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 3.9e-07 58.5 103 33.0
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 5.1e-07 58.2 103 31.1
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 6.7e-07 57.8 102 34.3
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 8.8e-07 57.4 134 31.3
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 8.8e-07 57.4 116 30.2
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 8.8e-07 57.4 123 35.0
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 1.1e-06 57.0 111 33.3
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 3.3e-06 55.5 125 35.2
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 4.4e-06 55.1 118 33.1
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 4.4e-06 55.1 103 32.0
Medtr3g076950 Medicago truncatula HOM05D010415 ORTHO05D013002 5.7e-06 54.7 111 38.7
Nitab4.5_0000025g0340 Nicotiana tabacum HOM05D016190 ORTHO05D017486 5.7e-06 54.7 43 55.8


User provided reference genes

Program Settings