Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 1.3e-120 436.4 222 100.0
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 1.5e-71 273.5 231 67.5
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 1.6e-70 270.0 213 69.0
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 1.9e-63 246.5 224 60.7
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 6.1e-62 241.5 194 68.6
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.0e-61 240.7 194 68.0
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 3.4e-60 235.7 224 58.9
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.7e-59 233.4 200 66.5
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 1.1e-58 230.7 221 61.1
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 1.1e-58 230.7 225 60.9
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 1.4e-58 230.3 225 57.3
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 3.1e-58 229.2 227 57.3
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 4.1e-58 228.8 225 57.8
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 1.2e-57 227.3 223 57.0
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 1.7e-56 223.4 205 60.5
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 5.6e-55 218.4 224 58.0
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 5.6e-55 218.4 222 57.7
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 9.5e-55 217.6 223 59.2
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.8e-54 216.1 210 57.6
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 4.7e-54 215.3 205 60.0
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 4.7e-54 215.3 225 53.8
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 4.7e-54 215.3 194 60.3
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 8.0e-54 214.5 212 57.5
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 2.3e-53 213.0 230 56.5
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 4.0e-53 212.2 222 57.7
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 6.8e-53 211.5 223 57.8
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 6.8e-53 211.5 223 57.8
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 1.7e-51 206.8 211 57.8
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 2.4e-50 203.0 218 50.5
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 3.2e-50 202.6 211 55.9
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 7.0e-50 201.4 213 55.4
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 1.2e-49 200.7 222 52.3
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 2.7e-49 199.5 226 50.4
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 4.6e-49 198.7 182 55.5
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 5.9e-49 198.4 221 52.5
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 1.1e-47 194.1 189 56.6
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 5.6e-47 191.8 198 55.1
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 9.5e-47 191.0 207 52.2
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 2.8e-46 189.5 154 59.1
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 6.2e-46 188.3 201 53.2
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 1.0e-45 187.6 211 50.2
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 2.3e-45 186.4 204 50.5
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 2.3e-45 186.4 214 48.1
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 2.3e-45 186.4 156 62.2
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 8.9e-45 184.5 215 49.8
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 8.9e-45 184.5 215 49.8
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 1.5e-44 183.7 155 60.0
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 2.6e-44 183.0 202 52.0
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 2.6e-44 183.0 205 50.7
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 3.4e-44 182.6 197 53.8
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 3.4e-44 182.6 166 54.8
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 9.8e-44 181.0 150 61.3
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 1.3e-43 180.6 139 63.3
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 2.2e-43 179.9 155 58.7
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 2.9e-43 179.5 206 48.5
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 6.4e-43 178.3 189 57.1
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 2.4e-42 176.4 224 48.7
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 9.2e-42 174.5 184 57.6
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 1.6e-41 173.7 121 70.2
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 2.0e-41 173.3 133 64.7
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 4.6e-41 172.2 138 61.6
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 1.7e-40 170.2 209 48.3
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 3.0e-40 169.5 178 50.6
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 5.0e-40 168.7 186 53.8
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 5.0e-40 168.7 203 48.3
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 1.1e-39 167.5 199 49.7
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 1.1e-39 167.5 214 47.7
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 1.1e-39 167.5 138 56.5
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 1.9e-39 166.8 211 48.8
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 3.3e-39 166.0 138 60.9
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 5.6e-39 165.2 140 60.0
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 9.5e-39 164.5 126 64.3
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 9.5e-39 164.5 126 64.3
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 9.5e-39 164.5 158 53.2
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 1.6e-38 163.7 205 45.9
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 1.6e-38 163.7 205 45.9
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 1.6e-38 163.7 183 51.9
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 3.6e-38 162.5 209 46.9
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 1.1e-37 161.0 116 63.8
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 1.4e-37 160.6 214 44.9
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 1.4e-37 160.6 214 44.9
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 1.8e-37 160.2 112 65.2
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 5.2e-37 158.7 142 54.2
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 1.5e-36 157.1 207 45.9
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 2.0e-36 156.8 222 43.2
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 3.4e-36 156.0 207 45.4
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 5.8e-36 155.2 142 52.8
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 9.8e-36 154.5 171 50.3
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 2.2e-35 153.3 175 47.4
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 2.2e-35 153.3 121 61.2
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 1.1e-34 151.0 99 72.7
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 7.8e-33 144.8 225 47.6
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 2.3e-32 143.3 140 52.9
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.1e-31 141.0 100 63.0
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 4.3e-31 139.0 167 50.9
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 7.3e-31 138.3 190 47.9
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 2.1e-30 136.7 132 50.0
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 8.9e-29 131.3 139 54.0
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 2.1e-25 120.2 237 38.8
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 1.7e-24 117.1 283 33.6
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 1.7e-24 117.1 93 63.4
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 3.6e-22 109.4 171 44.4
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 3.1e-21 106.3 73 67.1
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 4.0e-21 105.9 144 46.5
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 1.5e-20 104.0 178 37.1
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 4.4e-20 102.4 114 50.0
MCO16G316 Micromonas commoda HOM05D007263 ORTHO05D009187 3.2e-18 96.3 114 43.0
Cre12.g534450 Chlamydomonas reinhardtii HOM05D007263 ORTHO05D009187 4.8e-14 82.4 112 40.2
PRCOL_00003243 Prasinoderma coloniale HOM05D007263 ORTHO05D009187 2.9e-11 73.2 108 37.0
Sabra04G0132300 Salix brachista HOM05D000052 ORTHO05D001127 5.4e-10 68.9 56 60.7
MCO15G394 Micromonas commoda HOM05D003483 ORTHO05D004101 5.1e-08 62.4 148 32.4
Nitab4.5_0002016g0120 Nicotiana tabacum HOM05D002878 ORTHO05D003649 5.6e-07 58.9 117 31.6
Peaxi162Scf00450g00316 Petunia axillaris HOM05D002878 ORTHO05D003649 2.1e-06 57.0 134 29.1
Eucgr.I00922 Eucalyptus grandis HOM05D002878 ORTHO05D003649 2.8e-06 56.6 120 32.5
MSTRG.23744 Avicennia marina HOM05D002878 ORTHO05D003649 8.1e-06 55.1 135 31.9
COL.COLO4_11419 Corchorus olitorius HOM05D002878 ORTHO05D003649 8.1e-06 55.1 129 29.5


User provided reference genes

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