Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G152600 Prunus persica HOM05D002652 ORTHO05D002739 7.1e-43 176.8 85 100.0
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 1.1e-38 162.9 84 91.7
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-29 132.9 84 72.6
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 2.9e-28 128.3 84 71.4
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.9e-28 128.3 84 71.4
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 1.1e-24 116.3 85 65.9
RcHm_v2.0_Chr4g0395741 Rosa chinensis HOM05D002652 ORTHO05D002739 9.6e-24 113.2 84 63.1
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 6.9e-22 107.1 84 61.9
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 1.5e-21 105.9 84 59.5
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.5e-21 104.4 84 60.7
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.0e-20 103.2 85 61.2
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 1.1e-19 99.8 84 61.9
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 1.9e-19 99.0 81 60.5
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 5.5e-19 97.4 81 56.8
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 5.5e-19 97.4 84 56.0
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 3.5e-18 94.7 84 54.8
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 3.5e-18 94.7 85 56.5
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 4.6e-18 94.4 85 56.5
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 1.0e-17 93.2 84 53.6
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 1.8e-17 92.4 81 54.3
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 1.8e-17 92.4 81 54.3
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 3.0e-17 91.7 81 54.3
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 5.1e-17 90.9 81 54.3
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 5.1e-17 90.9 84 58.3
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.7e-17 90.1 80 55.0
Aa31LG7G1670 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.7e-17 90.1 80 55.0
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 2.5e-16 88.6 81 53.1
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 2.5e-16 88.6 81 53.1
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 2.5e-16 88.6 81 53.1
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 3.3e-16 88.2 84 48.8
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 4.3e-16 87.8 84 57.1
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 9.7e-16 86.7 81 53.1
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.7e-15 84.7 81 51.9
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 4.8e-15 84.3 80 52.5
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 1.8e-14 82.4 80 51.2
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.8e-14 82.4 84 51.2
Aa31LG7G1750 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.4e-14 82.0 81 50.6
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 2.4e-14 82.0 84 48.8
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.4e-14 82.0 84 50.0
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 5.3e-14 80.9 81 49.4
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.3e-14 80.9 80 47.5
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 9.0e-14 80.1 81 49.4
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.2e-13 79.7 77 46.8
RcHm_v2.0_Chr5g0024631 Rosa chinensis HOM05D002652 ORTHO05D002739 1.2e-13 79.7 55 69.1
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 1.5e-13 79.3 84 50.0
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 2.6e-13 78.6 85 54.1
FAN25G0269 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.4e-13 78.2 81 51.9
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 4.5e-13 77.8 87 54.0
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 4.5e-13 77.8 84 48.8
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 5.9e-13 77.4 86 52.3
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 7.7e-13 77.0 85 47.1
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 7.7e-13 77.0 55 65.5
FAN11G1518 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.0e-12 76.6 55 67.3
FAN16G2437 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.0e-12 76.6 55 67.3
FAN21G1568 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.0e-12 76.6 55 67.3
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 1.3e-12 76.3 84 51.2
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 2.9e-12 75.1 85 49.4
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.9e-12 75.1 84 51.2
Aa31LG9G4330 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.0e-12 74.3 81 46.9
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 6.5e-12 73.9 80 45.0
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 8.5e-12 73.6 84 44.0
FvH4_3g15000 Fragaria vesca HOM05D002652 ORTHO05D002739 8.5e-12 73.6 55 63.6
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-11 72.8 80 45.0
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 2.5e-11 72.0 85 43.5
Rhsim02G0047000 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.5e-11 72.0 84 44.0
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 3.2e-11 71.6 84 45.2
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 3.2e-11 71.6 84 44.0
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 5.5e-11 70.9 84 40.5
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.5e-11 70.9 81 44.4
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 5.5e-11 70.9 84 44.0
Sabra11G0121600 Salix brachista HOM05D002652 ORTHO05D002739 5.5e-11 70.9 85 45.9
CiPaw.01G177100 Carya illinoinensis HOM05D002652 ORTHO05D002739 7.2e-11 70.5 55 60.0
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 7.2e-11 70.5 85 41.2
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 9.4e-11 70.1 81 42.0
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 9.4e-11 70.1 85 41.2
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.2e-10 69.7 85 41.2
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.2e-10 69.7 85 45.9
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 1.2e-10 69.7 80 46.2
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.1e-10 68.9 84 41.7
RcHm_v2.0_Chr4g0395781 Rosa chinensis HOM05D002652 ORTHO05D002739 2.1e-10 68.9 47 63.8
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 2.7e-10 68.6 80 45.0
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 3.6e-10 68.2 84 42.9
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 4.6e-10 67.8 85 44.7
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 6.1e-10 67.4 85 45.9
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.0e-09 66.6 85 43.5
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.4e-09 66.2 82 43.9
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.4e-09 66.2 84 40.5
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.4e-09 66.2 84 41.7
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.8e-09 65.9 80 43.8
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.3e-09 65.5 85 43.5
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.3e-09 65.5 85 42.4
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 2.3e-09 65.5 84 41.7
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 3.0e-09 65.1 84 39.3
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.0e-09 65.1 85 41.2
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.0e-09 65.1 81 45.7
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.9e-09 64.7 80 43.8
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.9e-09 64.7 85 41.2
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 3.9e-09 64.7 84 41.7
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 5.1e-09 64.3 85 40.0
Sabra19G0035200 Salix brachista HOM05D002652 ORTHO05D002739 5.1e-09 64.3 84 44.0
Sabra19G0035400 Salix brachista HOM05D002652 ORTHO05D002739 5.1e-09 64.3 84 44.0
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 6.7e-09 63.9 56 60.7
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 6.7e-09 63.9 57 50.9
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 8.8e-09 63.5 84 40.5
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 8.8e-09 63.5 55 56.4
QL09p048820 Quercus lobata HOM05D002652 ORTHO05D002739 8.8e-09 63.5 60 55.0
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 8.8e-09 63.5 84 40.5
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 8.8e-09 63.5 84 38.1
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.1e-08 63.2 80 37.5
QL09p048410 Quercus lobata HOM05D002652 ORTHO05D002739 1.1e-08 63.2 62 53.2
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 1.1e-08 63.2 84 40.5
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.1e-08 63.2 81 45.7
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.1e-08 63.2 81 42.0
Migut.N00305 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.5e-08 62.8 79 43.0
QL09p048770 Quercus lobata HOM05D002652 ORTHO05D002739 1.5e-08 62.8 53 58.5
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.9e-08 62.4 81 37.0
Haze_11469 Corylus avellana HOM05D001102 ORTHO05D001018 2.5e-08 62.0 75 44.0
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.3e-08 61.2 84 36.9
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 7.4e-08 60.5 79 41.8
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 7.4e-08 60.5 80 41.2
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 7.4e-08 60.5 80 41.2
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.4e-08 60.5 85 43.5
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.4e-08 60.5 85 43.5
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.4e-08 60.5 84 36.9
TAR636G0960 Trochodendron aralioides HOM05D002652 ORTHO05D002739 7.4e-08 60.5 55 50.9
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 9.7e-08 60.1 80 33.8
Migut.N00889 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.3e-07 59.7 79 45.6
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.3e-07 59.7 85 38.8
TAR636G0198 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.3e-07 59.7 55 54.5
TAR636G2060 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.3e-07 59.7 54 51.9
GSVIVG01027930001 Vitis vinifera HOM05D002652 ORTHO05D002739 1.3e-07 59.7 82 40.2
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.7e-07 59.3 80 40.0
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.7e-07 59.3 80 40.0
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-07 59.3 79 41.8
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 2.2e-07 58.9 84 38.1
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.2e-07 58.9 80 40.0
Migut.N00886 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.8e-07 57.8 79 39.2
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 4.8e-07 57.8 84 34.5
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.3e-07 57.4 79 36.7
Oeu011211.1 Olea europaea HOM05D002652 ORTHO05D002739 6.3e-07 57.4 84 41.7
Rhsim09G0015400 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.3e-07 57.4 84 38.1
Migut.N00884 Erythranthe guttata HOM05D002652 ORTHO05D002739 8.2e-07 57.0 84 40.5
Rhsim02G0045000 Rhododendron simsii HOM05D002652 ORTHO05D002739 8.2e-07 57.0 79 39.2
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 8.2e-07 57.0 80 33.8
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.1e-06 56.6 79 35.4
Migut.N00883 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.4e-06 56.2 84 36.9
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-06 56.2 84 35.7
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 1.8e-06 55.8 84 35.7
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.8e-06 55.8 85 37.6
MD05G1227800 Malus domestica HOM05D002652 ORTHO05D002739 1.8e-06 55.8 43 62.8
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 3.1e-06 55.1 55 50.9
Aa31LG7G1730 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.1e-06 54.7 68 42.6
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.1e-06 54.7 72 37.5
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.1e-06 54.7 72 37.5
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 4.1e-06 54.7 80 42.5
Haze_26978 Corylus avellana HOM05D001102 ORTHO05D001018 5.3e-06 54.3 80 38.8
Lsat_1_v5_gn_2_105441 Lactuca sativa HOM05D002652 ORTHO05D002739 5.3e-06 54.3 85 38.8
DCAR_030376 Daucus carota HOM05D002652 ORTHO05D002739 6.9e-06 53.9 84 34.5
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 6.9e-06 53.9 84 35.7
QL09p048859 Quercus lobata HOM05D002652 ORTHO05D002739 9.1e-06 53.5 52 51.9
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.1e-06 53.5 84 36.9


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