Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.1e-149 532.3 269 100.0
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 2.0e-128 462.6 270 87.4
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 2.6e-115 419.1 259 78.8
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.3e-106 390.2 256 74.6
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 6.0e-104 381.3 260 74.6
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 8.7e-103 377.5 261 72.4
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 3.1e-100 369.0 257 71.2
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 5.3e-100 368.2 257 72.4
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.5e-99 366.7 260 72.3
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 2.6e-99 365.9 265 67.5
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 7.6e-99 364.4 245 73.1
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.7e-98 363.2 261 70.9
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 3.8e-98 362.1 260 70.8
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 4.9e-98 361.7 261 69.0
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 8.4e-98 360.9 260 69.2
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.4e-98 360.9 260 70.4
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.4e-97 359.4 260 70.0
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 4.2e-97 358.6 256 70.3
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 5.4e-97 358.2 250 72.4
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 9.3e-97 357.5 258 68.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 9.3e-97 357.5 261 65.1
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.6e-96 356.7 256 69.9
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.7e-96 355.9 260 68.8
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 4.6e-96 355.1 245 71.4
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 4.6e-96 355.1 282 64.9
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 7.9e-96 354.4 260 68.5
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.3e-95 352.8 261 71.3
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.0e-95 352.4 257 70.8
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 3.0e-95 352.4 260 68.5
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 6.7e-95 351.3 264 67.4
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 6.7e-95 351.3 260 68.1
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 8.7e-95 350.9 261 70.5
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 8.7e-95 350.9 257 65.0
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.5e-94 350.1 263 63.9
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.9e-94 349.7 258 68.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.5e-94 349.4 264 65.9
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 7.4e-94 347.8 257 70.4
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.6e-94 347.4 257 70.4
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.6e-93 346.7 257 70.0
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.6e-93 346.7 239 72.0
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 2.1e-93 346.3 251 65.7
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 2.8e-93 345.9 255 66.7
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 6.2e-93 344.7 256 66.8
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.2e-93 344.7 255 67.1
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 8.1e-93 344.4 258 67.8
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.1e-92 344.0 244 71.7
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.8e-92 343.2 265 63.0
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 3.1e-92 342.4 257 67.7
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 4.0e-92 342.0 287 61.7
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.2e-91 340.5 248 68.5
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.0e-91 339.7 251 68.5
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.6e-91 339.3 249 69.1
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 3.4e-91 339.0 256 65.6
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 7.6e-91 337.8 249 69.1
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 2.2e-90 336.3 247 68.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 2.9e-90 335.9 244 68.9
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.9e-90 335.9 256 64.8
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 2.9e-90 335.9 256 67.2
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.4e-89 333.6 247 69.6
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.9e-89 333.2 242 66.9
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 3.2e-89 332.4 246 65.9
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 3.2e-89 332.4 246 65.9
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 3.2e-89 332.4 263 62.4
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.2e-89 332.4 238 68.9
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 3.5e-88 328.9 246 65.4
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.5e-88 328.9 240 70.0
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 4.6e-88 328.6 249 66.3
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 7.9e-88 327.8 252 64.3
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.0e-87 327.4 245 66.1
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.0e-87 327.4 258 65.5
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.3e-87 327.0 246 65.0
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 2.3e-87 326.2 257 64.6
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.0e-87 325.9 248 63.7
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.0e-87 325.9 261 66.3
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 3.9e-87 325.5 255 64.7
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 5.1e-87 325.1 246 66.3
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 8.7e-87 324.3 246 64.6
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.5e-86 323.6 271 63.1
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.3e-86 322.4 256 61.7
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 4.3e-86 322.0 255 64.3
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 5.6e-86 321.6 243 65.0
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 5.6e-86 321.6 246 65.9
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 7.4e-86 321.2 252 64.3
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 9.6e-86 320.9 245 64.5
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.8e-85 319.3 252 63.9
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 6.2e-85 318.2 245 64.9
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 6.2e-85 318.2 253 64.8
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 4.0e-84 315.5 248 64.1
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.4e-81 307.0 231 65.8
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.6e-80 303.5 248 60.1
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.8e-79 300.1 251 59.4
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.9e-78 296.6 251 60.6
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.4e-76 290.4 287 55.4
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 5.3e-76 288.5 248 60.1
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.0e-74 284.3 264 56.8
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.8e-74 282.3 223 65.0
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.6e-72 276.9 240 60.0
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 7.9e-72 274.6 283 49.8
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 3.3e-70 269.2 234 60.3
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 6.9e-68 261.5 246 56.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.5e-67 258.8 171 73.7
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.3e-66 257.3 246 55.7
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 6.5e-66 255.0 262 52.3
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 5.5e-65 251.9 274 48.2
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 9.7e-62 241.1 171 67.3
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 2.4e-60 236.5 264 48.1
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.0e-59 233.4 208 56.2
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 4.5e-59 232.3 171 65.5
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.7e-58 230.3 195 60.0
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 5.5e-57 225.3 169 65.7
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.7e-56 222.2 151 70.9
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 2.6e-54 216.5 171 62.0
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 9.4e-49 198.0 229 43.7
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.2e-47 192.2 143 72.0
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 2.6e-46 189.9 150 67.3
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 5.7e-46 188.7 134 73.1
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.7e-45 187.2 143 69.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 3.7e-45 186.0 242 42.1
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.8e-45 185.7 139 70.5
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 3.6e-40 169.5 133 65.4
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.7e-38 162.2 218 39.4
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 1.3e-34 151.0 193 44.0
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 1.2e-32 144.4 148 46.6
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 8.3e-29 131.7 108 56.5
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.1e-28 131.3 96 68.8
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 2.3e-26 123.6 107 61.7
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 2.3e-26 123.6 107 61.7
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.0e-26 122.5 86 73.3
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 6.6e-26 122.1 91 69.2
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 8.6e-26 121.7 110 56.4
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.3e-25 119.8 89 59.6
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 4.9e-21 105.9 128 46.9
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.2e-19 101.3 254 32.3
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 7.8e-19 98.6 76 63.2
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 3.7e-13 79.7 245 29.4
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.3e-09 66.6 74 50.0
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.3e-09 65.5 74 48.6
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.3e-09 65.5 74 48.6


User provided reference genes

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