Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 3.8e-57 224.6 110 100.0
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 2.0e-13 79.3 85 58.8
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 4.4e-13 78.2 81 53.1
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 5.8e-13 77.8 86 54.7
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 2.2e-12 75.9 96 50.0
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 2.9e-12 75.5 86 47.7
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.9e-12 75.5 106 45.3
FAN05G4022 Fragaria x ananassa HOM05D022265 ORTHO05D010490 3.8e-12 75.1 96 51.0
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 3.8e-12 75.1 106 45.3
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 3.8e-12 75.1 106 45.3
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 8.4e-12 73.9 91 50.5
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 4.2e-11 71.6 87 47.1
RcHm_v2.0_Chr3g0470211 Rosa chinensis HOM05D022265 ORTHO05D010490 1.6e-10 69.7 91 47.3
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 2.1e-10 69.3 96 46.9
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 2.7e-10 68.9 103 44.7
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 3.5e-10 68.6 80 50.0
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 4.6e-10 68.2 104 45.2
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 1.0e-09 67.0 86 48.8
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 1.3e-09 66.6 84 50.0
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 1.7e-09 66.2 85 51.8
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 2.3e-09 65.9 109 39.4
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 3.9e-09 65.1 111 41.4
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 3.9e-09 65.1 85 45.9
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 6.6e-09 64.3 80 48.8
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.1e-08 63.5 114 40.4
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 1.5e-08 63.2 110 39.1
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 1.5e-08 63.2 110 39.1
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 4.3e-08 61.6 81 49.4
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 5.6e-08 61.2 79 44.3
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 9.6e-08 60.5 105 39.0
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 1.6e-07 59.7 78 44.9
Hma1.2p1_0101F.1_g049390 Hydrangea macrophylla HOM05D008514 ORTHO05D010490 1.6e-07 59.7 53 54.7
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 6.2e-07 57.8 111 37.8
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.1e-06 57.0 98 41.8
Solyc11g071380.1 Solanum lycopersicum HOM05D008514 ORTHO05D010490 1.1e-06 57.0 98 39.8
PGSC0003DMG400046267 Solanum tuberosum HOM05D008514 ORTHO05D010490 1.1e-06 57.0 107 40.2
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 2.4e-06 55.8 109 35.8
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 2.4e-06 55.8 98 40.8
Sopen11g029060 Solanum pennellii HOM05D008514 ORTHO05D010490 2.4e-06 55.8 79 45.6
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 6.9e-06 54.3 100 45.0
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 9.0e-06 53.9 79 40.5


User provided reference genes

Program Settings