Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 2.1e-40 168.7 91 100.0
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 2.4e-33 145.2 92 89.1
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 6.0e-32 140.6 92 85.9
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 1.1e-25 119.8 93 76.3
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.7e-24 115.2 93 75.3
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 6.0e-24 114.0 93 74.2
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 7.9e-24 113.6 97 74.2
FAN11G2911 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.4e-20 102.8 90 70.0
FAN21G1942 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.2e-19 99.8 90 70.0
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 3.6e-16 88.2 86 61.6
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 4.6e-16 87.8 99 56.6
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 1.4e-15 86.3 104 55.8
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.4e-15 86.3 105 58.1
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 8.8e-15 83.6 108 54.6
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 1.1e-14 83.2 97 58.8
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.5e-14 82.8 101 56.4
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 1.5e-14 82.8 101 56.4
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 7.4e-14 80.5 95 57.9
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.3e-13 79.7 81 61.7
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.3e-13 79.7 101 55.4
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 2.8e-13 78.6 102 52.9
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 6.3e-13 77.4 102 52.9
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 1.1e-12 76.6 104 51.9
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 1.4e-12 76.3 100 53.0
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 3.1e-12 75.1 97 56.7
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 4.1e-12 74.7 94 52.1
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 9.1e-12 73.6 99 55.6
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 1.2e-11 73.2 100 54.0
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.5e-11 72.8 92 52.2
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 2.0e-11 72.4 96 53.1
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 2.0e-11 72.4 107 51.4
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 7.7e-11 70.5 96 51.0
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 2.2e-10 68.9 105 47.6
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.9e-10 68.6 96 50.0
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 3.8e-10 68.2 103 52.4
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 3.8e-10 68.2 104 49.0
QL08p023218 Quercus lobata HOM05D008128 ORTHO05D010259 5.0e-10 67.8 92 53.3
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 8.5e-10 67.0 103 47.6
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 8.5e-10 67.0 103 45.6
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 8.5e-10 67.0 99 50.5
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.1e-09 66.6 103 46.6
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 1.1e-09 66.6 96 51.0
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 1.9e-09 65.9 47 74.5
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.9e-09 65.9 100 50.0
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 1.9e-09 65.9 101 46.5
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 1.9e-09 65.9 101 49.5
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.9e-09 65.9 97 49.5
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 2.5e-09 65.5 101 46.5
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 5.5e-09 64.3 85 61.2
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 7.2e-09 63.9 98 43.9
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 1.2e-08 63.2 103 45.6
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 2.1e-08 62.4 94 52.1
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 6.1e-08 60.8 92 45.7
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 1.0e-07 60.1 90 51.1
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 2.3e-07 58.9 101 45.5
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 5.1e-07 57.8 98 42.9
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 1.5e-06 56.2 105 40.0
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 5.7e-06 54.3 90 48.9
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 7.4e-06 53.9 100 38.0


User provided reference genes

Program Settings