Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 4.6e-59 231.1 124 100.0
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 7.2e-44 180.6 119 83.2
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.8e-42 176.0 118 83.9
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 2.3e-42 175.6 119 79.8
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.3e-42 175.6 119 79.8
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.7e-42 174.1 119 79.0
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 9.1e-39 163.7 115 74.8
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.5e-36 155.6 114 71.9
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.6e-35 152.9 137 61.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.7e-35 152.1 137 62.8
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.8e-34 149.4 127 65.4
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.0e-33 146.0 138 57.2
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 5.7e-33 144.4 109 68.8
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 7.4e-33 144.1 123 67.5
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 7.4e-33 144.1 101 72.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.3e-32 143.3 103 71.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.3e-32 143.3 138 60.1
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.2e-32 142.5 103 72.8
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.7e-32 141.7 103 71.8
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 8.2e-32 140.6 136 58.8
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.4e-31 139.8 131 63.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.8e-31 139.4 118 64.4
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 4.1e-31 138.3 102 69.6
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 5.3e-31 137.9 102 70.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 7.0e-31 137.5 111 68.5
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 7.0e-31 137.5 119 66.4
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 9.1e-31 137.1 114 65.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 9.1e-31 137.1 96 71.9
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.6e-30 136.3 102 75.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 1.6e-30 136.3 102 75.5
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.6e-30 136.3 102 75.5
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.6e-30 136.3 102 75.5
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 1.6e-30 136.3 102 75.5
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 1.6e-30 136.3 110 65.5
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.0e-30 136.0 132 64.4
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 2.0e-30 136.0 116 64.7
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 2.6e-30 135.6 122 63.9
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.6e-30 135.6 119 60.5
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 3.5e-30 135.2 101 69.3
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 4.5e-30 134.8 118 61.9
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 4.5e-30 134.8 102 72.5
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.9e-30 134.4 91 73.6
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 7.7e-30 134.0 101 68.3
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 7.7e-30 134.0 119 62.2
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.7e-30 134.0 136 57.4
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.0e-29 133.7 102 71.6
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.3e-29 133.3 109 67.9
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.7e-29 132.9 131 64.1
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 2.2e-29 132.5 102 71.6
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.2e-29 132.5 115 62.6
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 2.2e-29 132.5 109 67.9
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 5.0e-29 131.3 122 59.0
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 5.0e-29 131.3 105 65.7
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.0e-29 131.3 134 57.5
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 6.5e-29 131.0 97 71.1
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 8.5e-29 130.6 125 60.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.1e-28 130.2 108 66.7
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.1e-28 130.2 117 61.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.5e-28 129.8 111 63.1
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.5e-28 129.8 100 66.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.5e-28 129.0 114 62.3
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.5e-28 129.0 87 79.3
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.2e-28 128.3 117 65.0
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 4.2e-28 128.3 92 72.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 5.5e-28 127.9 125 60.0
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 9.4e-28 127.1 95 69.5
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 2.7e-27 125.6 135 58.5
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 2.7e-27 125.6 113 59.3
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.7e-27 125.6 135 55.6
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 6.1e-27 124.4 94 69.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.8e-26 122.9 137 51.8
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 6.7e-26 120.9 122 58.2
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.1e-25 120.2 117 55.6
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 1.5e-25 119.8 91 69.2
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 2.6e-25 119.0 126 52.4
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.6e-25 119.0 117 57.3
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.3e-25 118.6 106 57.5
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 5.7e-25 117.9 101 66.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 7.5e-25 117.5 122 54.9
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.7e-24 116.3 102 60.8
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 2.8e-24 115.5 122 56.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.1e-23 113.6 76 72.4
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.4e-23 113.2 90 67.8
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.4e-23 112.5 90 68.9
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 7.0e-23 110.9 90 66.7
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 4.5e-22 108.2 97 58.8
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 2.2e-21 105.9 156 44.9
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 3.8e-21 105.1 133 50.4
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 4.2e-20 101.7 137 47.4
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.1e-19 99.4 108 56.5
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.0e-18 97.1 100 58.0
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 4.4e-17 91.7 70 60.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.4e-15 86.7 97 52.6
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 2.4e-15 85.9 119 50.4
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 4.5e-14 81.6 86 52.3
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 1.7e-13 79.7 97 44.3
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 2.9e-13 79.0 47 70.2
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 5.0e-13 78.2 88 48.9
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 4.2e-12 75.1 49 67.3
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 3.0e-10 68.9 107 41.1
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-09 66.2 112 40.2
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 3.4e-09 65.5 99 43.4
FAN16G2470 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.4e-09 65.1 55 69.1
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 9.8e-09 63.9 70 58.6


User provided reference genes

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