Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G096900 Prunus persica HOM05D004185 ORTHO05D005294 1.2e-66 256.5 146 100.0
Prupe.6G095300 Prunus persica HOM05D004185 ORTHO05D005294 5.7e-40 167.9 123 74.0
FAN21G3167 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.0e-37 159.5 123 69.1
FvH4_3g33130 Fragaria vesca HOM05D004185 ORTHO05D005294 3.4e-37 158.7 123 69.1
FAN16G0073 Fragaria x ananassa HOM05D004185 ORTHO05D005294 5.9e-37 157.9 128 67.2
FAN25G2535 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.2e-36 156.0 123 68.3
FAN14G0322 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.9e-36 155.6 123 68.3
Medtr7g084480 Medicago truncatula HOM05D004185 ORTHO05D005294 2.9e-36 155.6 124 65.3
RcHm_v2.0_Chr7g0223141 Rosa chinensis HOM05D004185 ORTHO05D005294 2.9e-36 155.6 123 68.3
FvH4_6g09080 Fragaria vesca HOM05D004185 ORTHO05D005294 5.0e-36 154.8 123 68.3
TPR.G26467 Trifolium pratense HOM05D004185 ORTHO05D005294 6.5e-36 154.5 123 65.0
VMungo0464G1671 Vigna mungo HOM05D004185 ORTHO05D005294 1.4e-35 153.3 123 65.9
Lalb_Chr02g0153581 Lupinus albus HOM05D004185 ORTHO05D005294 1.9e-35 152.9 123 65.9
Psat3g092000 Pisum sativum HOM05D004185 ORTHO05D005294 1.9e-35 152.9 123 64.2
FAN05G5133 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.5e-35 152.5 123 68.3
QL08p064476 Quercus lobata HOM05D004185 ORTHO05D005294 2.5e-35 152.5 124 64.5
Cfa007152 Carpinus fangiana HOM05D004185 ORTHO05D005294 3.2e-35 152.1 128 64.1
Ca_08226_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 3.2e-35 152.1 123 64.2
MD11G1131000 Malus domestica HOM05D004185 ORTHO05D005294 3.2e-35 152.1 122 68.0
Haze_14968 Corylus avellana HOM05D004185 ORTHO05D005294 5.5e-35 151.4 128 64.8
Lj1g0009190 Lotus japonicus HOM05D004185 ORTHO05D005294 5.5e-35 151.4 123 65.0
Manes.11G075000 Manihot esculenta HOM05D004185 ORTHO05D005294 1.2e-34 150.2 128 60.9
Sabra16G0256800 Salix brachista HOM05D004185 ORTHO05D005294 1.6e-34 149.8 124 63.7
GSVIVG01032967001 Vitis vinifera HOM05D004185 ORTHO05D005294 2.7e-34 149.1 123 63.4
Cpa.g.sc139.45 Carica papaya HOM05D004185 ORTHO05D005294 3.6e-34 148.7 135 60.0
Glyma.16G046900 Glycine max HOM05D004185 ORTHO05D005294 3.6e-34 148.7 123 62.6
Lj2g0021694 Lotus japonicus HOM05D004185 ORTHO05D005294 3.6e-34 148.7 122 64.8
arahy.Tifrunner.gnm1.ann1.DC6XCB Arachis hypogaea HOM05D004185 ORTHO05D005294 6.1e-34 147.9 124 62.1
arahy.Tifrunner.gnm1.ann1.J4TN1Z Arachis hypogaea HOM05D004185 ORTHO05D005294 6.1e-34 147.9 124 62.1
Atru.chr11.1029 Acer truncatum HOM05D004185 ORTHO05D005294 7.9e-34 147.5 124 62.9
CANSAT80G1231 Cannabis sativa HOM05D004185 ORTHO05D005294 7.9e-34 147.5 121 65.3
MD03G1104300 Malus domestica HOM05D004185 ORTHO05D005294 7.9e-34 147.5 126 65.1
Sc07g0003880 Simmondsia chinensis HOM05D004185 ORTHO05D005294 7.9e-34 147.5 124 62.1
Rhsim01G0198500 Rhododendron simsii HOM05D004185 ORTHO05D005294 1.0e-33 147.1 134 58.2
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 1.4e-33 146.7 126 59.5
Potri.001G391400 Populus trichocarpa HOM05D004185 ORTHO05D005294 1.4e-33 146.7 124 62.1
CSS0015772 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 1.8e-33 146.4 134 59.0
PSO478G4545 Papaver somniferum HOM05D004185 ORTHO05D005294 1.8e-33 146.4 124 62.9
MD03G1104500 Malus domestica HOM05D004185 ORTHO05D005294 2.3e-33 146.0 122 65.6
Thecc.04G049500 Theobroma cacao HOM05D004185 ORTHO05D005294 3.0e-33 145.6 124 62.1
Atru.chr3.2840 Acer truncatum HOM05D004185 ORTHO05D005294 3.9e-33 145.2 124 62.1
TAR622G0010 Trochodendron aralioides HOM05D004185 ORTHO05D005294 3.9e-33 145.2 125 60.8
CAN.G767.4 Capsicum annuum HOM05D004185 ORTHO05D005294 8.8e-33 144.1 124 61.3
PGSC0003DMG402004569 Solanum tuberosum HOM05D004185 ORTHO05D005294 8.8e-33 144.1 124 61.3
AUR62008433 Chenopodium quinoa HOM05D004185 ORTHO05D005294 1.1e-32 143.7 125 60.8
vmacro18393 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 1.5e-32 143.3 125 58.4
EL10Ac5g11038 Beta vulgaris HOM05D004185 ORTHO05D005294 1.9e-32 142.9 125 60.0
THA.LOC104812726 Tarenaya hassleriana HOM05D004185 ORTHO05D005294 1.9e-32 142.9 123 59.3
AUR62021660 Chenopodium quinoa HOM05D004185 ORTHO05D005294 2.5e-32 142.5 125 60.0
PSO017G0731 Papaver somniferum HOM05D004185 ORTHO05D005294 2.5e-32 142.5 124 61.3
Gohir.A09G051200 Gossypium hirsutum HOM05D004185 ORTHO05D005294 3.3e-32 142.1 124 59.7
Os01g0276500 Oryza sativa ssp. japonica HOM05D004185 ORTHO05D005294 3.3e-32 142.1 123 61.0
Solyc10g005930.2 Solanum lycopersicum HOM05D004185 ORTHO05D005294 3.3e-32 142.1 124 60.5
Sopen10g001890 Solanum pennellii HOM05D004185 ORTHO05D005294 3.3e-32 142.1 124 60.5
FAN02G1839 Fragaria x ananassa HOM05D004185 ORTHO05D005294 5.7e-32 141.4 124 66.1
Gohir.D01G158300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 5.7e-32 141.4 124 58.9
Gorai.002G196300 Gossypium raimondii HOM05D004185 ORTHO05D005294 5.7e-32 141.4 124 58.9
Lj1A1083G27 Lonicera japonica HOM05D004185 ORTHO05D005294 5.7e-32 141.4 124 60.5
Rhsim08G0038300 Rhododendron simsii HOM05D004185 ORTHO05D005294 5.7e-32 141.4 123 61.0
Aqoxy6G01376 Aquilegia oxysepala HOM05D004185 ORTHO05D005294 7.4e-32 141.0 125 61.6
CARHR031200 Cardamine hirsuta HOM05D004185 ORTHO05D005294 7.4e-32 141.0 123 60.2
Duzib084G1135 Durio zibethinus HOM05D004185 ORTHO05D005294 7.4e-32 141.0 124 58.9
MBI07_g07565_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 9.7e-32 140.6 79 83.5
Oeu023432.1 Olea europaea HOM05D004185 ORTHO05D005294 9.7e-32 140.6 124 61.3
Actinidia37713 Actinidia chinensis HOM05D004185 ORTHO05D005294 1.3e-31 140.2 130 56.9
HanXRQChr03g0070171 Helianthus annuus HOM05D004185 ORTHO05D005294 1.3e-31 140.2 124 60.5
AL1G45960 Arabidopsis lyrata HOM05D004185 ORTHO05D005294 1.7e-31 139.8 123 58.5
AT1G31860 Arabidopsis thaliana HOM05D004185 ORTHO05D005294 2.2e-31 139.4 123 58.5
HanXRQChr05g0146191 Helianthus annuus HOM05D004185 ORTHO05D005294 2.2e-31 139.4 124 58.9
TWI63G0858 Tripterygium wilfordii HOM05D004185 ORTHO05D005294 2.2e-31 139.4 125 58.4
Lsat_1_v5_gn_9_110520 Lactuca sativa HOM05D004185 ORTHO05D005294 2.8e-31 139.0 122 60.7
Ciclev10005565m.g Citrus clementina HOM05D004185 ORTHO05D005294 3.7e-31 138.7 124 60.5
Gohir.1Z049352 Gossypium hirsutum HOM05D004185 ORTHO05D005294 3.7e-31 138.7 79 79.7
Gohir.D12G080201 Gossypium hirsutum HOM05D004185 ORTHO05D005294 3.7e-31 138.7 79 79.7
Dinv33271 Davidia involucrata HOM05D004185 ORTHO05D005294 4.8e-31 138.3 152 53.3
A09p34390 Brassica napus HOM05D004185 ORTHO05D005294 6.3e-31 137.9 123 58.5
BraA09t38984Z Brassica rapa HOM05D004185 ORTHO05D005294 6.3e-31 137.9 123 58.5
ECA232G0163 Erigeron canadensis HOM05D004185 ORTHO05D005294 6.3e-31 137.9 124 58.9
Eucgr.F01985 Eucalyptus grandis HOM05D004185 ORTHO05D005294 6.3e-31 137.9 124 58.9
Thhalv10008417m.g Eutrema salsugineum HOM05D004185 ORTHO05D005294 6.3e-31 137.9 136 53.7
MBI07_g13955_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 6.3e-31 137.9 123 60.2
Zm00001eb332710 Zea mays HOM05D004185 ORTHO05D005294 8.2e-31 137.5 123 58.5
BcaC05g27950 Brassica carinata HOM05D004185 ORTHO05D005294 1.1e-30 137.1 123 58.5
C05p39540 Brassica napus HOM05D004185 ORTHO05D005294 1.1e-30 137.1 123 58.5
BolC5t32695H Brassica oleracea HOM05D004185 ORTHO05D005294 1.1e-30 137.1 123 58.5
arahy.Tifrunner.gnm1.ann1.75SEPN Arachis hypogaea HOM05D004185 ORTHO05D005294 1.4e-30 136.7 124 57.3
Nitab4.5_0002655g0020 Nicotiana tabacum HOM05D004185 ORTHO05D005294 1.4e-30 136.7 135 55.6
Sp1g27580 Schrenkiella parvula HOM05D004185 ORTHO05D005294 1.4e-30 136.7 130 56.9
Actinidia19546 Actinidia chinensis HOM05D004185 ORTHO05D005294 1.8e-30 136.3 124 58.1
CiPaw.07G054200 Carya illinoinensis HOM05D004185 ORTHO05D005294 2.4e-30 136.0 120 60.8
Nn7g37500 Nelumbo nucifera HOM05D004185 ORTHO05D005294 2.4e-30 136.0 121 60.3
Hma1.2p1_0565F.1_g179520 Hydrangea macrophylla HOM05D004185 ORTHO05D005294 3.1e-30 135.6 126 59.5
Nn1g02944 Nelumbo nucifera HOM05D004185 ORTHO05D005294 3.1e-30 135.6 123 59.3
unitig_0.g1440 Utricularia gibba HOM05D004185 ORTHO05D005294 3.1e-30 135.6 139 56.8
BcaB07g32843 Brassica carinata HOM05D004185 ORTHO05D005294 4.1e-30 135.2 123 57.7
CDE02G0170 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 4.1e-30 135.2 123 59.3
Gorai.008G088200 Gossypium raimondii HOM05D004185 ORTHO05D005294 4.1e-30 135.2 115 60.9
Peaxi162Scf00060g00441 Petunia axillaris HOM05D004185 ORTHO05D005294 4.1e-30 135.2 124 58.1
DCAR_009570 Daucus carota HOM05D004185 ORTHO05D005294 5.3e-30 134.8 123 57.7
Gorai.006G057300 Gossypium raimondii HOM05D004185 ORTHO05D005294 6.9e-30 134.4 124 55.6
Nitab4.5_0000426g0080 Nicotiana tabacum HOM05D004185 ORTHO05D005294 6.9e-30 134.4 134 54.5
TAR374G1058 Trochodendron aralioides HOM05D004185 ORTHO05D005294 6.9e-30 134.4 146 52.7
CDE09G0075 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 9.1e-30 134.0 129 57.4
PGR142G0491 Punica granatum HOM05D004185 ORTHO05D005294 1.2e-29 133.7 124 58.1
Aa31LG2G14180 Aethionema arabicum HOM05D004185 ORTHO05D005294 1.5e-29 133.3 123 55.3
BcaB03g13785 Brassica carinata HOM05D004185 ORTHO05D005294 2.6e-29 132.5 136 52.9
BcaC05g27215 Brassica carinata HOM05D004185 ORTHO05D005294 4.5e-29 131.7 121 57.9
BolC5t31845H Brassica oleracea HOM05D004185 ORTHO05D005294 4.5e-29 131.7 121 57.9
SGA_v2.0_scaffold114G31833 Striga asiatica HOM05D004185 ORTHO05D005294 5.9e-29 131.3 124 58.1
A05p25460 Brassica napus HOM05D004185 ORTHO05D005294 7.7e-29 131.0 132 52.3
MELO3C005094.2 Cucumis melo HOM05D004185 ORTHO05D005294 1.0e-28 130.6 123 56.1
ATR0602G180 Amborella trichopoda HOM05D004185 ORTHO05D005294 1.3e-28 130.2 120 59.2
BraA05t21430Z Brassica rapa HOM05D004185 ORTHO05D005294 1.3e-28 130.2 128 53.9
CsaV3_5G025000 Cucumis sativus L. HOM05D004185 ORTHO05D005294 2.9e-28 129.0 123 55.3
Migut.D01934 Erythranthe guttata HOM05D004185 ORTHO05D005294 5.0e-28 128.3 124 55.6
SHI18823 Sapria himalayana HOM05D004185 ORTHO05D005294 8.5e-28 127.5 126 54.0
Gohir.D11G259201 Gossypium hirsutum HOM05D002015 ORTHO05D016007 1.1e-27 127.1 81 72.8
ClCG01G007890 Citrullus lanatus HOM05D004185 ORTHO05D005294 1.4e-27 126.7 121 53.7
MSTRG.11461 Avicennia marina HOM05D004185 ORTHO05D005294 3.2e-27 125.6 117 59.8
Gohir.D02G127900 Gossypium hirsutum HOM05D002015 ORTHO05D016007 3.2e-27 125.6 82 70.7
Gohir.D01G143966 Gossypium hirsutum HOM05D002015 ORTHO05D016007 4.2e-27 125.2 81 71.6
Gorai.002G177700 Gossypium raimondii HOM05D002015 ORTHO05D016007 7.2e-27 124.4 81 71.6
SalBow2G1694 Salvia bowleyana HOM05D004185 ORTHO05D005294 1.2e-26 123.6 116 56.0
Gohir.D04G064100 Gossypium hirsutum HOM05D002015 ORTHO05D016007 2.1e-26 122.9 81 70.4
AagrBONN_evm.TU.Sc2ySwM_228.4587 Anthoceros agrestis HOM05D004185 ORTHO05D005294 1.8e-25 119.8 83 68.7
SEGI_19426 Sequoiadendron giganteum HOM05D004185 ORTHO05D005294 1.8e-25 119.8 124 51.6
Mapoly0010s0125 Marchantia polymorpha HOM05D004185 ORTHO05D005294 3.9e-25 118.6 121 52.1
SMO119G0194 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 5.1e-25 118.2 125 49.6
Pp3c19_11880 Physcomitrium patens HOM05D004185 ORTHO05D005294 3.3e-24 115.5 119 52.9
CBR_g41148 Chara braunii HOM05D004185 ORTHO05D005294 2.8e-23 112.5 83 63.9
CBR_g45683 Chara braunii HOM05D004185 ORTHO05D005294 1.1e-22 110.5 78 66.7
vmacro12996 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 4.1e-22 108.6 71 73.2
RcHm_v2.0_Chr5g0060441 Rosa chinensis HOM05D004185 ORTHO05D005294 4.5e-21 105.1 93 63.4
MCO14G189 Micromonas commoda HOM05D004185 ORTHO05D005294 1.0e-20 104.0 116 49.1
Phvul.001G082700 Phaseolus vulgaris HOM05D004185 ORTHO05D005294 1.9e-19 99.8 93 61.3
Carub.0001s3019 Capsella rubella HOM05D004185 ORTHO05D005294 1.8e-17 93.2 94 53.2
Sed0024479 Sechium edule HOM05D004185 ORTHO05D005294 1.8e-17 93.2 93 54.8
Hund11935 Selenicereus undatus HOM05D004185 ORTHO05D005294 1.1e-16 90.5 93 54.8
Gohir.D09G052300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 2.6e-16 89.4 94 50.0
HPP92_023021 Vanilla planifolia HOM05D004185 ORTHO05D005294 3.3e-16 89.0 93 52.7
CSS0049496 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 4.8e-15 85.1 86 58.1
PRCOL_00000818 Prasinoderma coloniale HOM05D004185 ORTHO05D005294 4.8e-15 85.1 80 53.8
Cre13.g576650 Chlamydomonas reinhardtii HOM05D004185 ORTHO05D005294 3.1e-14 82.4 90 44.4
Cc02_g08450 Coffea canephora HOM05D004185 ORTHO05D005294 4.1e-14 82.0 92 48.9
Haze_15442 Corylus avellana HOM05D004185 ORTHO05D005294 5.9e-13 78.2 122 41.8
Gorai.005G143700 Gossypium raimondii HOM05D004185 ORTHO05D016007 1.3e-12 77.0 44 77.3
Cc00_g25400 Coffea canephora HOM05D004185 ORTHO05D005294 1.7e-12 76.6 92 50.0
Gohir.D13G151200 Gossypium hirsutum HOM05D004185 ORTHO05D016007 4.2e-11 72.0 44 68.2
CSS0023313 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 2.7e-10 69.3 36 88.9
Ca_29370_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 1.2e-08 63.9 84 39.3


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